Algorithms push forward the application of MALDI-TOF mass fingerprinting in rapid precise diagnosis

被引：9

作者：

Zhu, Yingdi ^{[1
,2
]}

Girault, Hubert H. ^{[2
]}

机构：

[1] Univ Chinese Acad Sci, Zhejiang Canc Hosp, Inst Basic Med & Canc IBMC, Chinese Acad Sci,Canc Hosp, Hangzhou, Peoples R China

[2] Ecole Polytech Fed Lausanne, Inst Chem Sci & Engn, Sch Basic Sci, Lausanne, Switzerland

来源：

VIEW | 2023年 / 4卷 / 02期

关键词：

antimicrobial susceptibility testing; biomarker discovery; MALDI-TOF mass fingerprinting; microbial identification; rapid precise diagnosis; LASER-DESORPTION IONIZATION; BACTERIAL IDENTIFICATION; SPECIES IDENTIFICATION; BIOMARKER DISCOVERY; PROTEIN PROFILES; SPECTROMETRY; TIME; DESORPTION/IONIZATION; NORMALIZATION; PHOTOCATALYSIS;

D O I：

10.1002/VIW.20220042

中图分类号：

TB3 [工程材料学];

学科分类号：

0805 ; 080502 ;

摘要：

Macromolecular mass fingerprinting using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry is a quick tool for biochemical analysis. In combination with algorithms for automated data analysis and interpretation, it has wide application potentials in life science, especially for diagnostic purposes. This review aims to illustrate recent advances of this analytical tool, focusing on the improvement of the experimental techniques, the data analysis algorithms, and more importantly the applications in rapid precise diagnosis.

引用

页数：10

共 96 条

[41] Highly efficient classification and identification of human pathogenic bacteria by MALDI-TOF MS [J].

Hsieh, Sen-Yung ;

Tseng, Chiao-Li ;

Lee, Yun-Shien ;

Kuo, An-Jing ;

Sun, Chien-Feng ;

Lin, Yen-Hsiu ;

Chen, Jen-Kun .

MOLECULAR & CELLULAR PROTEOMICS, 2008, 7 (02) :448-456

[42] Detection of carbapenem-resistant Klebsiella pneumoniae on the basis of matrix-assisted laser desorption ionization time-of-flight mass spectrometry by using supervised machine learning approach [J].

Huang, Tsi-Shu ;

Lee, Susan Shin-Jung ;

Lee, Chia-Chien ;

Chang, Fu-Chuen .

PLOS ONE, 2020, 15 (02)

[43] 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: Pluses, perils, and pitfalls [J].

Janda, J. Michael ;

Abbott, Sharon L. .

JOURNAL OF CLINICAL MICROBIOLOGY, 2007, 45 (09) :2761-2764

[44] Compelling Evidence for Lucky Survivor and Gas Phase Protonation: The Unified MALDI Analyte Protonation Mechanism [J].

Jaskolla, Thorsten W. ;

Karas, Michael .

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2011, 22 (06) :976-988

[45] Antimicrobial Susceptibility Testing: A Review of General Principles and Contemporary Practices [J].

Jorgensen, James H. ;

Ferraro, Mary Jane .

CLINICAL INFECTIOUS DISEASES, 2009, 49 (11) :1749-1755

[46]

Karas M, 2000, J MASS SPECTROM, V35, P1, DOI 10.1002/(SICI)1096-9888(200001)35:1<1::AID-JMS904>3.0.CO

[47]

2-0

[48] INFLUENCE OF THE WAVELENGTH IN HIGH-IRRADIANCE ULTRAVIOLET-LASER DESORPTION MASS-SPECTROMETRY OF ORGANIC-MOLECULES [J].

KARAS, M ;

BACHMANN, D ;

HILLENKAMP, F .

ANALYTICAL CHEMISTRY, 1985, 57 (14) :2935-2939

[49] LASER DESORPTION IONIZATION OF PROTEINS WITH MOLECULAR MASSES EXCEEDING 10000 DALTONS [J].

KARAS, M ;

HILLENKAMP, F .

ANALYTICAL CHEMISTRY, 1988, 60 (20) :2299-2301

[50] Fluorescent in situ hybridization allows rapid identification of microorganisms in blood cultures [J].

Kempf, VAJ ;

Trebesius, K ;

Autenrieth, IB .

JOURNAL OF CLINICAL MICROBIOLOGY, 2000, 38 (02) :830-838

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