Molecular insights into the differential membrane targeting of maximin 1 in prokaryotic and eukaryotic cells

被引:1
作者
Mensah, Jehoshaphat Oppong [1 ]
Boakye, Aaron [1 ]
Laryea, Michael [1 ]
Gasu, Edward Ntim [1 ]
Borquaye, Lawrence Sheringham [1 ,2 ]
机构
[1] Kwame Nkrumah Univ Sci & Technol, Dept Chem, Kumasi, Ghana
[2] Kwame Nkrumah Univ Sci & Technol, Cent Lab, Kumasi, Ghana
关键词
Antimicrobial resistance; antimicrobial peptides; drug discovery; molecular dynamics simulations; hemolytic activity of peptides; area per lipid; ANTIMICROBIAL PEPTIDES; DYNAMICS; GROMACS;
D O I
10.1080/07391102.2023.2292297
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Antimicrobial resistance is a pressing global health concern, underscoring the need for alternative treatments. Antimicrobial peptides (AMPs) have shown promise in this regard, with maximin 1 being a cationic, amphipathic AMP possessing antibacterial, antifungal, and antiviral activities with low hemolytic activity. In this study, we used molecular dynamics simulation to investigate the molecular basis for membrane selectivity of Maximin 1. By studying interactions between maximin 1 and different models of prokaryotic (anionic) and eukaryotic (zwitterionic) membranes, we found that Maximin 1 interacts more strongly with the prokaryotic membrane due to electrostatic attraction, while it weakly interacts with the zwitterionic eukaryotic membrane. Our simulations also revealed that Gly-1, Lys-5, Lys-11, Lys-15, and Lys-19 were identified to play a crucial role in the adsorption of maximin unto the prokaryotic membrane surface. The alpha-helical nature of the peptide, in addition to its amphipathic nature, was necessary for the adsorption of the peptide onto the surface of the prokaryotic membrane. Interestingly, the later transition of the alpha helix into a random coil was crucial in penetrating the prokaryotic membrane while hindering interactions with the eukaryotic membrane. Residues in the middle region of the peptide (residues 9-16) were also responsible for permeating the prokaryotic membrane over the eukaryotic membrane. These findings shed light on the peptide's selective targeting of bacterial membranes over human cell membranes and could inform the design of more effective AMPs.
引用
收藏
页码:1579 / 1592
页数:14
相关论文
共 40 条
[1]   Interactions of GF-17 derived from LL-37 antimicrobial peptide with bacterial membranes: a molecular dynamics simulation study [J].
Aghazadeh, Hossein ;
Ganjali Koli, Mokhtar ;
Ranjbar, Reza ;
Pooshang Bagheri, Kamran .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2020, 34 (12) :1261-1273
[2]   Interaction of the antimicrobial peptide cyclo(RRWWRF) with membranes by molecular dynamics simulations [J].
Appelt, C ;
Eisenmenger, F ;
Kühne, R ;
Schmieder, P ;
Söderhäll, JA .
BIOPHYSICAL JOURNAL, 2005, 89 (04) :2296-2306
[3]   Computational Methods and Tools in Antimicrobial Peptide Research [J].
Aronica, Pietro G. A. ;
Reid, Lauren M. ;
Desai, Nirali ;
Li, Jianguo ;
Fox, Stephen J. ;
Yadahalli, Shilpa ;
Essex, Jonathan W. ;
Verma, Chandra S. .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021, 61 (07) :3172-3196
[4]   Membrane Active Peptides and Their Biophysical Characterization [J].
Avci, Fatma Gizem ;
Akbulut, Berna Sariyar ;
Ozkirimli, Elif .
BIOMOLECULES, 2018, 8 (03)
[5]   PARTICLE MESH EWALD - AN N.LOG(N) METHOD FOR EWALD SUMS IN LARGE SYSTEMS [J].
DARDEN, T ;
YORK, D ;
PEDERSEN, L .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (12) :10089-10092
[6]   Infectious diseases: Considerations for the 21st century [J].
Fauci, AS .
CLINICAL INFECTIOUS DISEASES, 2001, 32 (05) :675-685
[7]   Comprehension of Top 200 Prescribed Drugs in the US as a Resource for Pharmacy Teaching, Training and Practice [J].
Fuentes, Andrea V. ;
Pineda, Moises D. ;
Venkata, Kalyan C. Nagulapalli .
PHARMACY, 2018, 6 (02)
[8]   Computational analysis of local membrane properties [J].
Gapsys, Vytautas ;
de Groot, Bert L. ;
Briones, Rodolfo .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2013, 27 (10) :845-858
[9]   Computer-aided design of proline-rich antimicrobial peptides based on the chemophysical properties of a peptide isolated from Olivancillaria hiatula [J].
Gasu, Edward Ntim ;
Mensah, John Kenneth ;
Borquaye, Lawrence Sheringham .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2023, 41 (17) :8254-8275
[10]   Peptide Mix from Olivancillaria hiatula Interferes with Cell-to-Cell Communication in Pseudomonas aeruginosa [J].
Gasu, Edward Ntim ;
Ahor, Hubert Senanu ;
Borquaye, Lawrence Sheringham .
BIOMED RESEARCH INTERNATIONAL, 2019, 2019