A prognostic model based on necroptosis-related genes for prognosis and therapy in bladder cancer

被引:0
|
作者
Wang, Zeyi [1 ]
Huang, Zhengnan [2 ]
Cao, Xiangqian [3 ]
Zhang, Fang [3 ]
Cai, Jinming [3 ]
Tang, Pengfei [1 ]
Yang, Chenkai [3 ]
Li, Shengzhou [3 ]
Yu, Dong [4 ]
Yan, Yilin [3 ]
Shen, Bing [1 ,3 ]
机构
[1] Nanjing Med Univ, Dept Urol, Shanghai Gen Hosp, Shanghai 200080, Peoples R China
[2] Tongji Univ, Tongji Hosp, Sch Med, Dept Urol, Shanghai 200065, Peoples R China
[3] Shanghai Jiao Tong Univ, Shanghai Gen Hosp, Dept Urol, Sch Med, Shanghai 200080, Peoples R China
[4] Naval Med Univ, Ctr Translat Med, Dept Precis Med, Shanghai 200082, Peoples R China
关键词
Bladder cancer; Necroptosis; Tumor immune microenvironment; Prognostic model; Immunotherapy; Chemotherapy; PROTEIN EXPRESSION; BREAST-CANCER; KINASE; CELLS; DOK7; PROLIFERATION; PROGRESSION; RESISTANCE; PROMOTES; IDENTIFICATION;
D O I
10.1186/s12894-023-01175-z
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Bladder cancer, one of the most prevalent malignant cancers, has high rate of recurrence and metastasis. Owing to genomic instability and high-level heterogeneity of bladder cancer, chemotherapy and immunotherapy drugs sensitivity and lack of prognostic markers, the prognosis of bladder cancer is unclear. Necroptosis is a programmed modality of necrotic cell death in a caspase-independent form. Despite the fact that necroptosis plays a critical role in tumor growth, cancer metastasis, and cancer patient prognosis, necroptosis-related gene sets have rarely been studied in bladder cancer. As a result, the development of new necroptosis-related prognostic indicators for bladder cancer patients is critical. Herein, we assessed the necroptosis landscape of bladder cancer patients from The Cancer Genome Atlas database and classified them into two unique necroptosis-related patterns, using the consensus clustering. Then, using five prognosis-related genes, we constructed a prognostic model (risk score), which contained 5 genes (ANXA1, DOK7, FKBP10, MAP1B and SPOCD1). And a nomogram model was also developed to offer the clinic with a more useful prognostic indicator. We found that risk score was significantly associated with clinicopathological characteristics, TIME, and tumor mutation burden in patients with bladder cancer. Moreover, risk score was a valid guide for immunotherapy, chemotherapy, and targeted drugs. In our study, DOK7 was chosen to further verify our prognosis model, and functional assays indicated that knockdown the expression of DOK7 could prompt bladder cancer proliferation and migration. Our work demonstrated the potential role of prognostic model based on necroptosis genes in the prognosis, immune landscape and response efficacy of immunotherapy of bladder cancer.
引用
收藏
页数:16
相关论文
共 50 条
  • [11] Identification and validation of a prognostic model of necroptosis-related lncRNAs in hepatocellular carcinoma
    Chen, Min
    Wu, Guang-Bo
    Hua, Shan
    Zhao, Zhi-Feng
    Li, Hong-Jie
    Luo, Meng
    FRONTIERS IN GENETICS, 2022, 13
  • [12] Establishment of a prognostic model for melanoma based on necroptosis-related genes
    Xiaohui Sui
    Xiaodan Zhang
    Junde Zhao
    Jinxing Liu
    Shuling Li
    Xiaowen Zhang
    Juntao Wang
    Functional & Integrative Genomics, 2023, 23
  • [13] A prognostic model for bladder cancer based on cytoskeleton-related genes
    Peng, Chunting
    Guo, Sufan
    Yang, Zheng
    Li, Xiaohong
    Su, Qisheng
    Mo, Wuning
    MEDICINE, 2023, 102 (17) : E33538
  • [14] Establishment of a Novel Prognostic Prediction Model for Gastric Cancer Based on Necroptosis-Related Genes
    Zhu, Zhong-zhong
    Zhang, Guanglin
    Liu, Jianping
    PATHOLOGY & ONCOLOGY RESEARCH, 2022, 28
  • [15] Necroptosis-Related Genes Associated With Immune Activity and Prognosis of Colorectal Cancer
    Peng, Xinyi
    Xu, Zhili
    Guo, Yong
    Zhu, Ying
    FRONTIERS IN GENETICS, 2022, 13
  • [16] Identification and Validation of Prognostic Model for Pancreatic Ductal Adenocarcinoma Based on Necroptosis-Related Genes
    Xie, Haoran
    Xu, Jingxian
    Xie, Zhiwen
    Xie, Ni
    Lu, Jiawei
    Yu, Lanting
    Li, Baiwen
    Cheng, Li
    FRONTIERS IN GENETICS, 2022, 13
  • [17] The Prediction of Necroptosis-Related lncRNAs in Prognosis and Anticancer Therapy of Colorectal Cancer
    Xiao, Hanyu
    Pang, Qidan
    Wang, Yong
    Lai, Suhe
    Chen, Hong
    ANALYTICAL CELLULAR PATHOLOGY, 2022, 2022
  • [18] An Efficient Signature Based on Necroptosis-Related Genes for Prognosis of Patients With Pancreatic Cancer
    Shi, Heng
    Peng, Qin
    Zhou, Xianling
    He, Yushan
    Sun, Shengyun
    FRONTIERS IN GENETICS, 2022, 13
  • [19] Development and Validation of a Prognostic Model for Esophageal Adenocarcinoma Based on Necroptosis-Related Genes
    Zhang, Suhong
    Liu, Shuang
    Lin, Zheng
    Zhang, Juwei
    Lin, Zhifeng
    Fang, Haiyin
    Hu, Zhijian
    GENES, 2022, 13 (12)
  • [20] Establishment of lung adenocarcinoma classification and risk model based on necroptosis-related genes
    Wu, Guodong
    Feng, Dingwei
    Zhang, Ziyu
    Zhang, Gao
    Zhang, Wei
    FRONTIERS IN GENETICS, 2022, 13