A prognostic model based on necroptosis-related genes for prognosis and therapy in bladder cancer

被引:0
|
作者
Wang, Zeyi [1 ]
Huang, Zhengnan [2 ]
Cao, Xiangqian [3 ]
Zhang, Fang [3 ]
Cai, Jinming [3 ]
Tang, Pengfei [1 ]
Yang, Chenkai [3 ]
Li, Shengzhou [3 ]
Yu, Dong [4 ]
Yan, Yilin [3 ]
Shen, Bing [1 ,3 ]
机构
[1] Nanjing Med Univ, Dept Urol, Shanghai Gen Hosp, Shanghai 200080, Peoples R China
[2] Tongji Univ, Tongji Hosp, Sch Med, Dept Urol, Shanghai 200065, Peoples R China
[3] Shanghai Jiao Tong Univ, Shanghai Gen Hosp, Dept Urol, Sch Med, Shanghai 200080, Peoples R China
[4] Naval Med Univ, Ctr Translat Med, Dept Precis Med, Shanghai 200082, Peoples R China
关键词
Bladder cancer; Necroptosis; Tumor immune microenvironment; Prognostic model; Immunotherapy; Chemotherapy; PROTEIN EXPRESSION; BREAST-CANCER; KINASE; CELLS; DOK7; PROLIFERATION; PROGRESSION; RESISTANCE; PROMOTES; IDENTIFICATION;
D O I
10.1186/s12894-023-01175-z
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Bladder cancer, one of the most prevalent malignant cancers, has high rate of recurrence and metastasis. Owing to genomic instability and high-level heterogeneity of bladder cancer, chemotherapy and immunotherapy drugs sensitivity and lack of prognostic markers, the prognosis of bladder cancer is unclear. Necroptosis is a programmed modality of necrotic cell death in a caspase-independent form. Despite the fact that necroptosis plays a critical role in tumor growth, cancer metastasis, and cancer patient prognosis, necroptosis-related gene sets have rarely been studied in bladder cancer. As a result, the development of new necroptosis-related prognostic indicators for bladder cancer patients is critical. Herein, we assessed the necroptosis landscape of bladder cancer patients from The Cancer Genome Atlas database and classified them into two unique necroptosis-related patterns, using the consensus clustering. Then, using five prognosis-related genes, we constructed a prognostic model (risk score), which contained 5 genes (ANXA1, DOK7, FKBP10, MAP1B and SPOCD1). And a nomogram model was also developed to offer the clinic with a more useful prognostic indicator. We found that risk score was significantly associated with clinicopathological characteristics, TIME, and tumor mutation burden in patients with bladder cancer. Moreover, risk score was a valid guide for immunotherapy, chemotherapy, and targeted drugs. In our study, DOK7 was chosen to further verify our prognosis model, and functional assays indicated that knockdown the expression of DOK7 could prompt bladder cancer proliferation and migration. Our work demonstrated the potential role of prognostic model based on necroptosis genes in the prognosis, immune landscape and response efficacy of immunotherapy of bladder cancer.
引用
收藏
页数:16
相关论文
共 50 条
  • [1] A prognostic model based on necroptosis-related genes for prognosis and therapy in bladder cancer
    Zeyi Wang
    Zhengnan Huang
    Xiangqian Cao
    Fang Zhang
    Jinming Cai
    Pengfei Tang
    Chenkai Yang
    Shengzhou Li
    Dong Yu
    Yilin Yan
    Bing Shen
    BMC Urology, 23
  • [2] Identification of Bladder Cancer Subtypes Based on Necroptosis-Related Genes, Construction of a Prognostic Model
    Nie, Shiwen
    Huili, Youlong
    He, Yadong
    Hu, Junchao
    Kang, Shaosan
    Cao, Fenghong
    FRONTIERS IN SURGERY, 2022, 9
  • [3] Prognosis Risk Model Based on Necroptosis-Related Signature for Bladder Cancer
    Chen, Zhenghao
    Cao, Rui
    Wang, Ren
    Wang, Yichuan
    Shang, Donghao
    Tian, Ye
    GENES, 2022, 13 (11)
  • [4] Development of a prognostic model for children with neuroblastoma based on necroptosis-related genes
    Chu, Jing
    FRONTIERS IN GENETICS, 2022, 13
  • [5] A novel model based on necroptosis-related genes for predicting immune status and prognosis in glioma
    Yuan, Ying-Shi
    Jin, Xin
    Chen, Lu
    Liao, Jia-Min
    Zhang, Yang
    Yu, Ke-Wei
    Li, Wei-Kang
    Cao, Shun-Wang
    Huang, Xian-Zhang
    Kang, Chun-Min
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [6] Classification of molecular subtypes for colorectal cancer and development of a prognostic model based on necroptosis-related genes
    Li, Mengling
    Lu, Ming
    Li, Jun
    Gui, Qingqing
    Xia, Yibin
    Lu, Chao
    Shu, Hongchun
    HELIYON, 2024, 10 (05)
  • [7] A New Prognostic Signature Constructed with Necroptosis-Related lncRNA in Bladder Cancer
    Yu, Zuhu
    Lu, Bin
    Gao, Hong
    Liang, Rongfang
    JOURNAL OF ONCOLOGY, 2022, 2022
  • [8] A novel necroptosis-related genes signature to predict prognosis and treatment response in bladder cancer
    Yao, Dongnuan
    Yu, Weitao
    Ma, Xueming
    Tian, Junqiang
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2024, 11
  • [9] Integrated Analysis of Necroptosis-Related Genes for Prognosis, Immune Microenvironment Infiltration, and Drug Sensitivity in Colon Cancer
    He, Rong
    Zhang, Meiling
    He, Lian
    Huang, Jiabin
    Man, Changfeng
    Wang, Xiaoyan
    Lang, Yakun
    Fan, Yu
    FRONTIERS IN MEDICINE, 2022, 9
  • [10] Establishment of a prognostic model for melanoma based on necroptosis-related genes
    Sui, Xiaohui
    Zhang, Xiaodan
    Zhao, Junde
    Liu, Jinxing
    Li, Shuling
    Zhang, Xiaowen
    Wang, Juntao
    FUNCTIONAL & INTEGRATIVE GENOMICS, 2023, 23 (03)