OCTA-500: A retinal dataset for optical coherence tomography angiography study

被引:51
作者
Li, Mingchao [1 ]
Huang, Kun [1 ]
Xu, Qiuzhuo [1 ]
Yang, Jiadong [1 ]
Zhang, Yuhan [1 ]
Ji, Zexuan [1 ]
Xie, Keren [2 ]
Yuan, Songtao [2 ]
Liu, Qinghuai [2 ]
Chen, Qiang [1 ]
机构
[1] Nanjing Univ Sci & Technol, Sch Comp Sci & Engn, Nanjing 210094, Peoples R China
[2] Nanjing Med Univ, Dept Hematol, Affiliated Hosp 1, Nanjing 210029, Peoples R China
基金
中国国家自然科学基金;
关键词
Medical image dataset; Retina; OCTA; Segmentation; FOVEAL AVASCULAR ZONE; CONVOLUTIONAL NEURAL-NETWORK; ARTERY-VEIN DIFFERENTIATION; VESSEL SEGMENTATION; AUTOMATED SEGMENTATION; DIABETIC-RETINOPATHY; LAYER BOUNDARIES; OCT-ANGIOGRAPHY; AV-NET; IMAGES;
D O I
10.1016/j.media.2024.103092
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Optical coherence tomography angiography (OCTA) is a novel imaging modality that has been widely utilized in ophthalmology and neuroscience studies to observe retinal vessels and microvascular systems. However, publicly available OCTA datasets remain scarce. In this paper, we introduce the largest and most comprehensive OCTA dataset dubbed OCTA-500, which contains OCTA imaging under two fields of view (FOVs) from 500 subjects. The dataset provides rich images and annotations including two modalities (OCT/OCTA volumes), six types of projections, four types of text labels (age/gender/eye/disease) and seven types of segmentation labels (large vessel/capillary/artery/vein/2D FAZ/3D FAZ/retinal layers). Then, we propose a multi-object segmentation task called CAVF, which integrates capillary segmentation, artery segmentation, vein segmentation, and FAZ segmentation under a unified framework. In addition, we optimize the 3D -to -2D image projection network (IPN) to IPN-V2 to serve as one of the segmentation baselines. Experimental results demonstrate that IPN-V2 achieves an about 10% mIoU improvement over IPN on CAVF task. Finally, we further study the impact of several dataset characteristics: the training set size, the model input (OCT/OCTA, 3D volume/2D projection), the baseline networks, and the diseases. The dataset and code are publicly available at: https://ieee-dataport.org/open-access/octa-500.
引用
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页数:16
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