Identification of a broadly fibrogenic macrophage subset induced by type 3 inflammation

被引:107
作者
Fabre, Thomas [1 ]
Barron, Alexander M. S. [1 ]
Christensen, Stephen M. [1 ]
Asano, Shoh [1 ]
Bound, Kathryn [1 ]
Lech, Matthew P. [1 ]
Wadsworth, Marc H., II [1 ]
Chen, Xiao [1 ]
Wang, Chang [1 ]
Wang, Ju [1 ]
McMahon, James [1 ]
Schlerman, Franklin [1 ]
White, Alexis [1 ]
Kravarik, Kellie M. [1 ]
Fisher, Andrew J. [2 ]
Borthwick, Lee A. [3 ]
Hart, Kevin M. [1 ]
Henderson, Neil C. [4 ,5 ]
Wynn, Thomas A. [1 ]
Dower, Ken
机构
[1] Pfizer Inc, Cambridge, MA 02139 USA
[2] Newcastle Univ, Translat & Clin Res Inst, Fac Med Sci, Newcastle Upon Tyne, Tyne & Wear, England
[3] Newcastle Univ, Biosci Inst, Newcastle Fibrosis Res Grp, Newcastle Upon Tyne, Tyne & Wear, England
[4] Univ Edinburgh, Inst Genet & Canc, MRC Human Genet Unit, Edinburgh, Midlothian, Scotland
[5] Univ Edinburgh, Queens Med Res Inst, Ctr Inflammat Res, Edinburgh, Midlothian, Scotland
关键词
TISSUE-REPAIR; MECHANISMS; FIBROSIS; DISTINCT; CELLS;
D O I
10.1126/sciimmunol.add8945
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Macrophages are central orchestrators of the tissue response to injury, with distinct macrophage activation states playing key roles in fibrosis progression and resolution. Identifying key macrophage populations found in human fibrotic tissues could lead to new treatments for fibrosis. Here, we used human liver and lung single-cell RNA sequencing datasets to identify a subset of CD9(+)TREM2(+) macrophages that express SPP1, GPNMB, FABP5, and CD63. In both human and murine hepatic and pulmonary fibrosis, these macrophages were enriched at the outside edges of scarring and adjacent to activated mesenchymal cells. Neutrophils expressing MMP9, which participates in the activation of TGF-beta 1, and the type 3 cytokines GM-CSF and IL-17A coclustered with these macrophages. In vitro, GM-CSF, IL-17A, and TGF-beta 1 drive the differentiation of human monocytes into macrophages expressing scar-associated markers. Such differentiated cells could degrade collagen IV but not collagen I and promote TGF- beta 1-induced collagen I deposition by activated mesenchymal cells. In murine models blocking GM-CSF, IL-17A or TGF-beta 1 reduced scar-associated macrophage expansion and hepatic or pulmonary fibrosis. Our work identifies a highly specific macrophage population to which we assign a profibrotic role across species and tissues. It further provides a strategy for unbiased discovery, triage, and preclinical validation of therapeutic targets based on this fibrogenic macrophage population.
引用
收藏
页数:16
相关论文
共 60 条
  • [1] Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis
    Adams, Taylor S.
    Schupp, Jonas C.
    Poli, Sergio
    Ayaub, Ehab A.
    Neumark, Nir
    Ahangari, Farida
    Chu, Sarah G.
    Raby, Benjamin A.
    DeTullis, Giuseppe
    Januszyk, Michael
    Duan, Qiaonan
    Arnett, Heather A.
    Siddiqui, Asim
    Washko, George R.
    Homer, Robert
    Yan, Xiting
    Rosas, Ivan O.
    Kaminski, Naftali
    [J]. SCIENCE ADVANCES, 2020, 6 (28)
  • [2] Nebulosa recovers single-cell gene expression signals by kernel density estimation
    Alquicira-Hernandez, Jose
    Powell, Joseph E.
    [J]. BIOINFORMATICS, 2021, 37 (16) : 2485 - 2487
  • [3] Single-Cell, Single-Nucleus, and Spatial RNA Sequencing of the Human Liver Identifies Cholangiocyte and Mesenchymal Heterogeneity
    Andrews, Tallulah S.
    Atif, Jawairia
    Liu, Jeff C.
    Perciani, Catia T.
    Ma, Xue-Zhong
    Thoeni, Cornelia
    Slyper, Michal
    Eraslan, Gokcen
    Segerstolpe, Asa
    Manuel, Justin
    Chung, Sai
    Winter, Erin
    Cirlan, Iulia
    Khuu, Nicholas
    Fischer, Sandra
    Rozenblatt-Rosen, Orit
    Regev, Aviv
    McGilvray, Ian D.
    Bader, Gary D.
    MacParland, Sonya A.
    [J]. HEPATOLOGY COMMUNICATIONS, 2022, 6 (04) : 821 - 840
  • [4] Pathology of non-alcoholic fatty liver disease
    Bedossa, Pierre
    [J]. LIVER INTERNATIONAL, 2017, 37 : 85 - 89
  • [5] Generalizing RNA velocity to transient cell states through dynamical modeling
    Bergen, Volker
    Lange, Marius
    Peidli, Stefan
    Wolf, F. Alexander
    Theis, Fabian J.
    [J]. NATURE BIOTECHNOLOGY, 2020, 38 (12) : 1408 - 1414
  • [6] Variability in the analysis of a single neuroimaging dataset by many teams
    Botvinik-Nezer, Rotem
    Holzmeister, Felix
    Camerer, Colin F.
    Dreber, Anna
    Huber, Juergen
    Johannesson, Magnus
    Kirchler, Michael
    Iwanir, Roni
    Mumford, Jeanette A.
    Adcock, R. Alison
    Avesani, Paolo
    Baczkowski, Blazej M.
    Bajracharya, Aahana
    Bakst, Leah
    Ball, Sheryl
    Barilari, Marco
    Bault, Nadege
    Beaton, Derek
    Beitner, Julia
    Benoit, Roland G.
    Berkers, Ruud M. W. J.
    Bhanji, Jamil P.
    Biswal, Bharat B.
    Bobadilla-Suarez, Sebastian
    Bortolini, Tiago
    Bottenhorn, Katherine L.
    Bowring, Alexander
    Braem, Senne
    Brooks, Hayley R.
    Brudner, Emily G.
    Calderon, Cristian B.
    Camilleri, Julia A.
    Castrellon, Jaime J.
    Cecchetti, Luca
    Cieslik, Edna C.
    Cole, Zachary J.
    Collignon, Olivier
    Cox, Robert W.
    Cunningham, William A.
    Czoschke, Stefan
    Dadi, Kamalaker
    Davis, Charles P.
    Luca, Alberto De
    Delgado, Mauricio R.
    Demetriou, Lysia
    Dennison, Jeffrey B.
    Di, Xin
    Dickie, Erin W.
    Dobryakova, Ekaterina
    Donnat, Claire L.
    [J]. NATURE, 2020, 582 (7810) : 84 - +
  • [7] Lineage-Specific Biology Revealed by a Finished Genome Assembly of the Mouse
    Church, Deanna M.
    Goodstadt, Leo
    Hillier, LaDeana W.
    Zody, Michael C.
    Goldstein, Steve
    She, Xinwe
    Bult, Carol J.
    Agarwala, Richa
    Cherry, Joshua L.
    DiCuccio, Michael
    Hlavina, Wratko
    Kapustin, Yuri
    Meric, Peter
    Maglott, Donna
    Birtle, Zoe
    Marques, Ana C.
    Graves, Tina
    Zhou, Shiguo
    Teague, Brian
    Potamousis, Konstantinos
    Churas, Christopher
    Place, Michael
    Herschleb, Jill
    Runnheim, Ron
    Forrest, Daniel
    Amos-Landgraf, James
    Schwartz, David C.
    Cheng, Ze
    Lindblad-Toh, Kerstin
    Eichler, Evan E.
    Ponting, Chris P.
    [J]. PLOS BIOLOGY, 2009, 7 (05):
  • [8] Single-Cell RNA-Seq Reveals the Transcriptional Landscape and Heterogeneity of Aortic Macrophages in Murine Atherosclerosis
    Cochain, Clement
    Vafadarnejad, Ehsan
    Arampatzi, Panagiota
    Pelisek, Jaroslav
    Winkels, Holger
    Ley, Klaus
    Wolf, Dennis
    Saliba, Antoine-Emmanuel
    Zernecke, Alma
    [J]. CIRCULATION RESEARCH, 2018, 122 (12) : 1661 - 1674
  • [9] Presentation, diagnosis and clinical course of the spectrum of progressive-fibrosing interstitial lung diseases
    Cottin, Vincent
    Hirani, Nikhil A.
    Hotchkin, David L.
    Nambiar, Anoop M.
    Ogura, Takashi
    Otaola, Maria
    Skowasch, Dirk
    Park, Jong Sun
    Poonyagariyagorn, Hataya K.
    Wuyts, Wim
    Wells, Athol U.
    [J]. EUROPEAN RESPIRATORY REVIEW, 2018, 27 (150)
  • [10] Dynamic Shifts in the Composition of Resident and Recruited Macrophages Influence Tissue Remodeling in NASH
    Daemen, Sabine
    Gainullina, Anastasiia
    Kalugotla, Gowri
    He, Li
    Chan, Mandy M.
    Beals, Joseph W.
    Liss, Kim H.
    Klein, Samuel
    Feldstein, Ariel E.
    Finck, Brian N.
    Artyomov, Maxim N.
    Schilling, Joel D.
    [J]. CELL REPORTS, 2021, 34 (02):