Effects of Hydrogen Peroxide on the Hydrogen Bonding Structure and Dynamics of Water and Its Influence on the Aqueous Solvation of the Insulin Monomer

被引:3
作者
Parida, Chinmay [1 ]
Chowdhuri, Snehasis [1 ]
机构
[1] Indian Inst Technol, Sch Basic Sci, Bhubaneswar 752050, India
关键词
PARTICLE MESH EWALD; MOLECULAR-DYNAMICS; AB-INITIO; MONTE-CARLO; OXIDATION; CLUSTERS; COMPLEXES; DIFFUSION; H2O2-CENTER-DOT-CENTER-DOT-CENTER-DOT(H2O)(N); ENVIRONMENT;
D O I
10.1021/acs.jpcb.3c05107
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The hydrogen bond structure and dynamics of water and hydrogen peroxide (H2O2) in their binary mixtures have been studied at 298 K by classical molecular dynamics simulations. Twelve different concentrations of aqueous-H2O2 solutions are considered for this study. We have analyzed the interactions between water and H2O2 by site-site pair correlation functions and observed that the probability of formation of O-W<middle dot><middle dot><middle dot>H-P hydrogen bonds are higher compared to O-P<middle dot><middle dot><middle dot>H-W. The second solvation shell of water is strongly affected by increasing H2O2 concentrations (X-P > 0.50), which signifies the destruction of the tetrahedral network structure of water. The translational and rotational dynamics of water and H2O2 do not significantly change up to 25% of H2O2 in aqueous mixtures. The hydrogen bond lifetime of water-water, water-H2O2, and H2O2-H2O2 in the aqueous-H2O2 solutions shows a very minimal change with increasing H2O2 concentrations. In addition to this, we also investigated the effect of H2O2 on the insulin monomer and observed that higher concentrations of H2O2 (X-P = 0.10) change the secondary structure. The influence of H2O2 is more on chain-B than that on chain-A in the insulin monomer. The H2O2 occupancy at the protein surface is higher for negatively charged (GLU) and polar (ASN and THR) amino acid residues compared with that for positively charged and neutral residues in the solutions.
引用
收藏
页码:10814 / 10823
页数:10
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