Addressing the complexities in measuring cyclodextrin-sterol binding constants: A multidimensional study

被引:5
作者
Anderson, Amelia M. [1 ,2 ,3 ]
Manet, Ilse [4 ]
Malanga, Milo [5 ,6 ]
Clemens, Daniel M. [1 ]
Sadrerafi, Keivan [1 ]
Pineiro, Angel [2 ,7 ]
Garcia-Fandino, Rebeca [3 ,7 ]
O'Connor, Matthew S. [1 ]
机构
[1] Cyclar Therapeut, 8001 Redwood Blvd, Novato, CA 94945 USA
[2] Univ Santiago de Compostela, Dept Fis Aplicada, Fac Fis, E-15782 Santiago De Compostela, Spain
[3] Univ Santiago de Compostela, Ctr Singular Invest Quim Biolox & Mat Mol CiQUS, Dept Quim Organ, Campus Vida S-N, E-15782 Santiago De Compostela, Spain
[4] Consiglio Nazl Ric CNR, Ist Sintesi Organ & Fotoreata ISOF, Via P Gobetti 101, I-40129 Bologna, Italy
[5] CarboHyde, Berlin U 47-49, H-1045 Budapest, Hungary
[6] Cyclolab Cyclodextrin Res & Dev Ltd, Illat Ut 7, H-1097 Budapest, Hungary
[7] MD USE Innovat Solut SL, Edificio Emprendia,Campus Vida, Santiago De Compostela, Spain
关键词
Cyclodextrin; Inclusion complex; Affinity constant; Circular dichroism; Isothermal titration calorimetry; Metadynamics simulations; PARTICLE MESH EWALD; BETA-CYCLODEXTRIN; MOLECULAR-DYNAMICS; INCLUSION COMPLEX; AQUEOUS-SOLUTION; SECONDARY FACES; DIMERS; CHOLESTEROL; RECOGNITION; 7-KETOCHOLESTEROL;
D O I
10.1016/j.carbpol.2023.121360
中图分类号
O69 [应用化学];
学科分类号
081704 ;
摘要
A class of cyclodextrin (CD) dimers has emerged as a potential new treatment for atherosclerosis; they work by forming strong, soluble inclusion complexes with oxysterols, allowing the body to reduce and heal arterial plaques. However, characterizing the interactions between CD dimers and oxysterols presents formidable challenges due to low sterol solubility, the synthesis of modified CDs resulting in varying number and position of molecular substitutions, and the diversity of interaction mechanisms. To address these challenges and illuminate the nuances of CD-sterol interactions, we have used multiple orthogonal approaches for a comprehensive characterization. Results obtained from three independent techniques - metadynamics simulations, competitive isothermal titration calorimetry, and circular dichroism - to quantify CD-sterol binding are presented. The objective of this study is to obtain the binding constants and gain insights into the intricate nature of the system, while accounting for the advantages and limitations of each method. Notably, our findings demonstrate similar to 1000x stronger affinity of the CD dimer for 7-ketocholesterol in comparison to cholesterol for the 1:1 complex in direct binding assays. These methodologies and findings not only enhance our understanding of CD dimer-sterol interactions, but could also be generally applicable to prediction and quantification of other challenging host-guest complex systems.
引用
收藏
页数:13
相关论文
共 84 条
  • [1] Gromacs: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
    Abraham, Mark James
    Murtola, Teemu
    Schulz, Roland
    Páll, Szilárd
    Smith, Jeremy C.
    Hess, Berk
    Lindah, Erik
    [J]. SoftwareX, 2015, 1-2 : 19 - 25
  • [2] New cyclodextrin dimers and trimers capable of forming supramolecular adducts with shape-specific ligands
    Aime, Silvio
    Gianolio, Eliana
    Arena, Francesca
    Barge, Alessandro
    Martina, Katia
    Heropoulos, George
    Cravotto, Giancarlo
    [J]. ORGANIC & BIOMOLECULAR CHEMISTRY, 2009, 7 (02) : 370 - 379
  • [3] Encapsulation of phenolic acids into cyclodextrins: A global statistical analysis of the effects of pH, temperature and concentrations on binding constants measured by ACE methods
    Aksamija, Amra
    Tomao, Valerie
    Dangles, Olivier
    Plasson, Raphael
    [J]. ELECTROPHORESIS, 2022, 43 (23-24) : 2290 - 2301
  • [4] Dynamics of supramolecular association monitored by fluorescence correlation spectroscopy
    Al-Soufi, Wajih
    Reija, Belen
    Felekyan, Suren
    Seidel, Claus A. M.
    Novo, Mercedes
    [J]. CHEMPHYSCHEM, 2008, 9 (13) : 1819 - 1827
  • [5] Solubilization of cholesterol in aqueous solution by two β-cyclodextrin dimers and a negatively charged β-cyclodextrin derivative
    Alvarez Alcalde, Mercedes
    Antelo, Alvaro
    Jover, Aida
    Meijide, Francisco
    Vazquez Tato, Jose
    [J]. JOURNAL OF INCLUSION PHENOMENA AND MACROCYCLIC CHEMISTRY, 2009, 63 (3-4) : 309 - 317
  • [6] A close-up on doxorubicin binding to γ-cyclodextrin: an elucidating spectroscopic, photophysical and conformational study
    Anand, Resmi
    Ottani, Stefano
    Manoli, Francesco
    Manet, Ilse
    Monti, Sandra
    [J]. RSC ADVANCES, 2012, 2 (06) : 2346 - 2357
  • [7] 7-Ketocholesterol in disease and aging
    Anderson, Amelia
    Campo, Angielyn
    Fulton, Elena
    Corwin, Anne
    Jerome, W. Gray, III
    O'Connor, Matthew S.
    [J]. REDOX BIOLOGY, 2020, 29
  • [8] Cyclodextrin dimers: A versatile approach to optimizing encapsulation and their application to therapeutic extraction of toxic oxysterols
    Anderson, Amelia M.
    Kirtadze, Tamari
    Malanga, Milo
    Dinh, Darren
    Barnes, Carolyn
    Campo, Angielyn
    Clemens, Daniel M.
    Garcia-Fandino, Rebeca
    Pinero, Angel
    O'Connor, Matthew S.
    [J]. INTERNATIONAL JOURNAL OF PHARMACEUTICS, 2021, 606
  • [9] Dramatically Increased Binding Constant of Water-Soluble Cyclodextrin Hyperbranched Polymers: Explored with Diffusion Ordered NMR Spectroscopy (DOSY)
    Anh Thi Ngoc Doan
    Van Thi Hong Doan
    Katsuki, Jun
    Fujii, Shota
    Kono, Hiroyuki
    Sakurai, Kazuo
    [J]. ACS OMEGA, 2022, 7 (13): : 10890 - 10900
  • [10] [Anonymous], 2017, MathWorks-Makers of MATLAB and Simulink