Liquid-Liquid Phase Separation of the Intrinsically Disordered Domain of the Fused in Sarcoma Protein Results in Substantial Slowing of Hydration Dynamics

被引:7
|
作者
Krevert, Carola S. [1 ]
Chavez, Daniel [2 ]
Chatterjee, Sayantan [1 ,3 ]
Stelzl, Lukas S. [4 ,5 ,6 ]
Puetz, Sabine [1 ]
Roeters, Steven J. [7 ,8 ]
Rudzinski, Joseph F. [2 ,9 ]
Fawzi, Nicolas L. [10 ]
Girard, Martin [2 ]
Parekh, Sapun H. [1 ,3 ]
Hunger, Johannes [1 ]
机构
[1] Max Planck Inst Polymer Res, Dept Mol Spect, D-55128 Mainz, Germany
[2] Max Planck Inst Polymer Res, Dept Polymer Theory, D-55128 Mainz, Germany
[3] Univ Texas Austin, Dept Biomed Engn, Austin, TX 78712 USA
[4] Johannes Gutenberg Univ Mainz, Inst Phys, KOMET1, D-55099 Mainz, Germany
[5] Johannes Gutenberg Univ Mainz, Fac Biol, D-55128 Mainz, Germany
[6] Inst Mol Biol IMB, D-55128 Mainz, Germany
[7] Aarhus Univ, Dept Chem, DK-8000 Aarhus, Denmark
[8] Vrije Univ, Dept Anat & Neurosci, Amsterdam UMC, NL-1081 HZ Amsterdam, Netherlands
[9] Humboldt Univ, Humboldt Universitat Berlin, D-12489 Berlin, Germany
[10] Brown Univ, Dept Mol Biol Cell Biol & Biochem, Providence, RI 02912 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY LETTERS | 2023年 / 14卷 / 49期
基金
欧洲研究理事会; 美国国家卫生研究院; 美国国家科学基金会;
关键词
2-DIMENSIONAL INFRARED-SPECTROSCOPY; 2D IR SPECTROSCOPY; HYDROGEN-BOND; VIBRATIONAL SPECTROSCOPY; ALANINE DIPEPTIDE; FORCE-FIELD; SIMULATION; WATER; PEPTIDES; CONFORMATION;
D O I
10.1021/acs.jpclett.3c02790
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Formation of liquid condensates plays a critical role in biology via localization of different components or via altered hydrodynamic transport, yet the hydrogen-bonding environment within condensates, pivotal for solvation, has remained elusive. We explore the hydrogen-bond dynamics within condensates formed by the low-complexity domain of the fused in sarcoma protein. Probing the hydrogen-bond dynamics sensed by condensate proteins using two-dimensional infrared spectroscopy of the protein amide I vibrations, we find that frequency-frequency correlations of the amide I vibration decay on a picosecond time scale. Interestingly, these dynamics are markedly slower for proteins in the condensate than in a homogeneous protein solution, indicative of different hydration dynamics. All-atom molecular dynamics simulations confirm that lifetimes of hydrogen-bonds between water and the protein are longer in the condensates than in the protein in solution. Altered hydrogen-bonding dynamics may contribute to unique solvation and reaction dynamics in such condensates.
引用
收藏
页码:11224 / 11234
页数:11
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