Bioprospecting phytochemicals of Rosmarinus officinalis L. for targeting SARS-CoV-2 main protease (Mpro): a computational study

被引:11
|
作者
Patel, Unnati [1 ]
Desai, Krishna [2 ]
Dabhi, Ranjitsinh C. [1 ]
Maru, Jayesh J. [1 ]
Shrivastav, Pranav S. [1 ]
机构
[1] Gujarat Univ, Univ Sch Sci, Dept Chem, Ahmadabad 380009, India
[2] Gujarat Univ, Univ Sch Sci, Dept Bot Bioinformat & Climate Change Impacts Mana, Ahmadabad 380009, India
关键词
Rosmarinus officinalis L; SARS-CoV-2; M-pro; Molecular docking; ADMET; Drug-likeness study; Molecular dynamics; DERIVATIVES; INHIBITORS; DOCKING; OILS;
D O I
10.1007/s00894-023-05569-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ContextThe persistent spread of highly contagious COVID-19 disease is one of the deadliest occurrences in the history of mankind. Despite the distribution of numerous efficacious vaccines and their extensive usage, the perpetual effectiveness of immunization is being catechized. Therefore, discovering an alternative therapy to control and prevent COVID-19 infections has become a top priority. The main protease (M-pro) plays a key role in viral replication, making it an intriguing pharmacological target for SARS-CoV-2.MethodsIn this context, virtual screening of thirteen bioactive polyphenols and terpenoids of Rosmarinus officinalis L. was performed using several computational modules including molecular docking, ADMET, drug-likeness characteristics, and molecular dynamic simulation to predict the potential inhibitors against SARS-CoV-2 M-pro (PDB: 6LU7). The results suggest that apigenin, betulinic acid, luteolin, carnosol, and rosmarinic acid may emerge as potential inhibitors of SARS-CoV-2 with acceptable drug-likeness, pharmacokinetics, ADMET characteristics, and binding interactions comparable with remdesivir and favipiravir. These findings imply that some of the active components of Rosmarinus officinalis L. can serve as an effective antiviral source for the development of therapeutics for SARS-CoV-2 infection.
引用
收藏
页数:15
相关论文
共 50 条
  • [1] Bioprospecting phytochemicals of Rosmarinus officinalis L. for targeting SARS-CoV-2 main protease (Mpro): a computational study
    Unnati Patel
    Krishna Desai
    Ranjitsinh C. Dabhi
    Jayesh J. Maru
    Pranav S. Shrivastav
    Journal of Molecular Modeling, 2023, 29
  • [2] Exploring the Therapeutic Potential of Petiveria alliacea L. Phytochemicals: A Computational Study on Inhibiting SARS-CoV-2's Main Protease (Mpro)
    Ali, Md. Ahad
    Sheikh, Humaira
    Yaseen, Muhammad
    Faruqe, Md Omar
    Ullah, Ihsan
    Kumar, Neeraj
    Bhat, Mashooq Ahmad
    Mollah, Md. Nurul Haque
    MOLECULES, 2024, 29 (11):
  • [3] Targeting allosteric pockets of SARS-CoV-2 main protease Mpro
    Bhat, Zahoor Ahmad
    Chitara, Dheeraj
    Iqbal, Jawed
    Sanjeev, B. S.
    Madhumalar, Arumugam
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2022, 40 (14): : 6603 - 6618
  • [4] Computational analysis of substrate recognition of Sars-Cov-2 Mpro main protease
    Tasci, Hilal Sena
    Akkus, Ebru
    Yildiz, Muslum
    Kocak, Abdulkadir
    COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2023, 107
  • [5] Progress in Research on Inhibitors Targeting SARS-CoV-2 Main Protease (Mpro)
    Yang, Yue
    Luo, Yi-Dan
    Zhang, Chen-Bo
    Xiang, Yang
    Bai, Xin-Yue
    Zhang, Die
    Fu, Zhao-Ying
    Hao, Ruo-Bing
    Liu, Xiao-Long
    ACS OMEGA, 2024, 9 (32): : 34196 - 34219
  • [6] Targeting SARS-CoV-2 Main Protease: A Computational Drug Repurposing Study
    Baby, Krishnaprasad
    Maity, Swastika
    Mehta, Chetan H.
    Suresh, Akhil
    Nayak, Usha Y.
    Nayak, Yogendra
    ARCHIVES OF MEDICAL RESEARCH, 2021, 52 (01) : 38 - 47
  • [7] In-silico drug repurposing for targeting SARS-CoV-2 main protease (Mpro)
    Sharma, Shilpa
    Deep, Shashank
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2022, 40 (07): : 3003 - 3010
  • [8] Protegrin-2, a potential inhibitor for targeting SARS-CoV-2 main protease Mpro
    Jan, Zainab
    Geethakumari, Anupriya M.
    Biswas, Kabir H.
    Jithesh, Puthen Veettil
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 21 : 3665 - 3671
  • [9] Identification of antiviral phytochemicals from cranberry as potential inhibitors of SARS-CoV-2 main protease (Mpro)
    Pillai, U. Jisha
    Cherian, Lucy
    Taunk, Khushman
    Iype, Eldhose
    Dutta, Mainak
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 261
  • [10] Phytochemicals of Euphorbia hirta L. and Their Inhibitory Potential Against SARS-CoV-2 Main Protease
    Cayona, Ruel
    Creencia, Evelyn
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 8