An image processing-based quantification of gram variability in Acinetobacter baumannii

被引:1
作者
Canciello, Sofia [1 ]
Parisi, Miranda [1 ]
Lucidi, Massimiliano [2 ]
Visca, Paolo [2 ,3 ]
Cincotti, Gabriella [1 ]
机构
[1] Roma Tre Univ, Dept Engn, Via V Volterra 62, I-00146 Rome, Italy
[2] Roma Tre Univ, Dept Sci, Rome, Italy
[3] Santa Lucia Fdn IRCCS, Rome, Italy
关键词
Acinetobacter baumannii; cell counting; color threshold; gram variability; image processing; SURVIVAL;
D O I
10.1002/jemt.24271
中图分类号
R602 [外科病理学、解剖学]; R32 [人体形态学];
学科分类号
100101 ;
摘要
Gram staining differentiates bacteria as gram-positive and gram-negative, depending on their cell wall constituents, and coloring cells in violet and pink, respectively. Sometimes, a subpopulation of the same bacterial species assumes different colors, ranging from pink to violet, for reasons that are not completely understood yet. We analyze conventional brightfield images and use an automated pipeline to count pink and violet cells. The ImageJ-based processing algorithm quantifies the gram variability in Acinetobacter baumannii ACICU in the stationary phase of growth with a percentage of 66% pink cells. Different bacterial strains and cell growth stages have been considered. Research HighlightsGram staining differentiates bacteria into gram-positive (violet) and gram-negative (pink). Gram variability represents an inhomogeneous distribution of pink and violet cells within the same species. We developed an ImageJ-based pipeline for the quantification of Gram variability in Acinetobacter baumannii.
引用
收藏
页码:378 / 382
页数:5
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