Growth-rate dependency of ribosome abundance and translation elongation rate in Corynebacterium glutamicum differs from that in Escherichia coli

被引:6
作者
Matamouros, Susana [1 ]
Gensch, Thomas [2 ]
Cerff, Martin [1 ]
Sachs, Christian C. [1 ]
Abdollahzadeh, Iman [2 ]
Hendriks, Johnny [2 ]
Horst, Lucas [1 ]
Tenhaef, Niklas [1 ]
Tenhaef, Julia [1 ]
Noack, Stephan [1 ]
Graf, Michaela [3 ]
Takors, Ralf [3 ]
Noeh, Katharina [1 ]
Bott, Michael [1 ]
机构
[1] Forschungszentrum Julich, Inst Bioand Geosci, IBG 1 Biotechnol, Julich, Germany
[2] Forschungszentrum Julich, Inst Biol Informat Proc, IBI 1 Mol & Cellular Physiol, Julich, Germany
[3] Univ Stuttgart, Inst Biochem Engn, Stuttgart, Germany
关键词
GENE-EXPRESSION; PROTEIN-SYNTHESIS; RNA-POLYMERASE; IN-VIVO; SPATIAL-ORGANIZATION; STRINGENT RESPONSE; RIBONUCLEIC-ACID; CELL-GROWTH; TRANSCRIPTION; LOCALIZATION;
D O I
10.1038/s41467-023-41176-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Bacterial growth rate (mu) depends on the protein synthesis capacity of the cell and thus on the number of active ribosomes and their translation elongation rate. The relationship between these fundamental growth parameters have only been described for few bacterial species, in particular Escherichia coli. Here, we analyse the growth-rate dependency of ribosome abundance and translation elongation rate for Corynebacterium glutamicum, a gram-positive model species differing from E. coli by a lower growth temperature optimum and a lower maximal growth rate. We show that, unlike in E. coli, there is little change in ribosome abundance for mu <0.4 h(-1) in C. glutamicum and the fraction of active ribosomes is kept above 70% while the translation elongation rate declines 5-fold. Mathematical modelling indicates that the decrease in the translation elongation rate can be explained by a depletion of translation precursors.
引用
收藏
页数:14
相关论文
共 5 条
  • [1] Rrna transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli
    Gourse, RL
    Gaal, T
    Bartlett, MS
    Appleman, JA
    Ross, W
    ANNUAL REVIEW OF MICROBIOLOGY, 1996, 50 : 645 - 677
  • [2] Colloidal Physics Modeling Reveals How Per-Ribosome Productivity Increases with Growth Rate in Escherichia coli
    Maheshwari, Akshay J. J.
    Sunol, Alp M. M.
    Gonzalez, Emma
    Endy, Drew
    Zia, Roseanna N. N.
    MBIO, 2023, 14 (01):
  • [3] Pareto optimality between growth-rate and lag-time couples metabolic noise to phenotypic heterogeneity in Escherichia coli
    Fuentes, Diego Antonio Fernandez
    Manfredi, Pablo
    Jenal, Urs
    Zampieri, Mattia
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [4] EFFECTS OF N-TERMINAL DELETIONS OF THE ESCHERICHIA-COLI PROTEIN FIS ON GROWTH-RATE, TRNA(2)(SER) EXPRESSION AND CELL MORPHOLOGY
    SPAENYDEKKING, L
    NILSSON, L
    VONEULER, A
    VANDEPUTTE, P
    GOOSEN, N
    MOLECULAR & GENERAL GENETICS, 1995, 246 (02): : 259 - 265
  • [5] HIGH-CONCENTRATIONS OF PPGPP DECREASE THE RNA CHAIN GROWTH-RATE - IMPLICATIONS FOR PROTEIN-SYNTHESIS AND TRANSLATIONAL FIDELITY DURING AMINO-ACID STARVATION IN ESCHERICHIA-COLI
    SORENSEN, MA
    JENSEN, KF
    PEDERSEN, S
    JOURNAL OF MOLECULAR BIOLOGY, 1994, 236 (02) : 441 - 454