Analyzing angiogenesis on a chip using deep learning-based image processing

被引:9
|
作者
Choi, Dong-Hee [1 ]
Liu, Hui-Wen [1 ]
Jung, Yong Hun [1 ]
Ahn, Jinchul [1 ]
Kim, Jin-A [1 ]
Oh, Dongwoo [3 ]
Jeong, Yeju [1 ]
Kim, Minseop [3 ]
Yoon, Hongjin [1 ]
Kang, Byengkyu [1 ]
Hong, Eunsol [1 ]
Song, Euijeong [2 ]
Chung, Seok [1 ,3 ,4 ]
机构
[1] Korea Univ, Sch Mech Engn, Seoul 02841, South Korea
[2] Next&Bio Inc, Seoul, South Korea
[3] Korea Univ, KU KIST Grad Sch Converging Sci & Technol, Seoul 02841, South Korea
[4] Korea Inst Sci & Technol KIST, Brain Sci Inst, Ctr Brain Technol, Seoul 02792, South Korea
关键词
CELL; MECHANISMS; DISEASE;
D O I
10.1039/d2lc00983h
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Angiogenesis, the formation of new blood vessels from existing vessels, has been associated with more than 70 diseases. Although numerous studies have established angiogenesis models, only a few indicators can be used to analyze angiogenic structures. In the present study, we developed an image-processing pipeline based on deep learning to analyze and quantify angiogenesis. We utilized several image-processing algorithms to quantify angiogenesis, including a deep learning-based cell nuclear segmentation algorithm and image skeletonization. This method could quantify and measure changes in blood vessels in response to biochemical gradients using 16 indicators, including length, width, number, and nuclear distribution. Moreover, this procedure is highly efficient for the three-dimensional quantitative analysis of angiogenesis and can be applied to diverse angiogenesis investigations.
引用
收藏
页码:475 / 484
页数:10
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