Whole genome sequencing followed by functional analysis of genomic deletion encompassing ERCC8 and NDUFAF2 genes in a non-consanguineous Indian family reveals dysfunctional mitochondrial bioenergetics leading to infant mortality

被引:1
作者
Sabharwal, Ankit [1 ,2 ,5 ]
Gupta, Vishu [1 ,2 ]
Kv, Shamsudheen [1 ,2 ]
Manokaran, Ranjith Kumar [3 ]
Verma, Ankit [1 ]
Mishra, Anushree [3 ]
Bhoyar, Rahul C. [1 ]
Jain, Abhinav [1 ,2 ]
Sivadas, Ambily [1 ,2 ]
Rawat, Sonali [4 ]
Jolly, Bani [1 ,2 ]
Mohanty, Sujata [4 ]
Gulati, Sheffali [3 ]
Gupta, Neerja [3 ]
Kabra, Madhulika [3 ]
Scaria, Vinod [1 ,2 ]
Sivasubbu, Sridhar [1 ,2 ]
机构
[1] CSIR Inst Genom & Integrat Biol CSIR IGIB, Delhi, India
[2] Acad Sci & Innovat Res AcSIR, Ghaziabad 201002, India
[3] All India Inst Med Sci AIIMS, Dept Pediat, New Delhi, India
[4] All India Inst Med Sci AIIMS, Stem Cell Facil, Delhi, India
[5] Univ Texas Austin, Dell Med Sch, Dept Pediat, Austin, TX USA
关键词
Whole genome sequencing; Deletion; Mitochondrial disorder; Leigh syndrome; Carrier screening; COCKAYNE-SYNDROME; CSB PROTEIN; EXCISION-REPAIR; DNA; MUTATIONS; PATIENT; NUCLEOTIDE; DISORDERS; CELLS;
D O I
10.1016/j.mito.2024.101844
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Genomic investigations on an infant who presented with a putative mitochondrial disorder led to identification of compound heterozygous deletion with an overlapping region of similar to 142 kb encompassing two nuclear encoded genes namely ERCC8 and NDUFAF2. Investigations on fetal-derived fibroblast culture demonstrated impaired bioenergetics and mitochondrial dysfunction, which explains the phenotype and observed infant mortality in the present study. The genetic findings from this study extended the utility of whole-genome sequencing as it led to development of a MLPA-based assay for carrier screening in the extended family and the prenatal testing aiding in the birth of two healthy children.
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页数:14
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