RNA modifications in physiology and disease: towards clinical applications

被引:92
作者
Delaunay, Sylvain [1 ]
Helm, Mark [2 ]
Frye, Michaela [1 ]
机构
[1] Deutsch Krebsforschungszentrum DKFZ, Div Mech Regulating Gene Express, Heidelberg, Germany
[2] Johannes Gutenberg Univ Mainz, Inst Pharmaceut & Biomed Sci, Mainz, Germany
关键词
ANTIMICROBIAL RESISTANCE SURVEILLANCE; ESCHERICHIA-COLI; ANTIBIOTIC-RESISTANCE; HUMAN HEALTH; CTX-M; VETERINARY ANTIBIOTICS; GENOMIC EPIDEMIOLOGY; GENES; EVOLUTION; INSIGHTS;
D O I
10.1038/s41576-023-00645-2
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The ability of chemical modifications of single nucleotides to alter the electrostatic charge, hydrophobic surface and base pairing of RNA molecules is exploited for the clinical use of stable artificial RNAs such as mRNA vaccines and synthetic small RNA molecules - to increase or decrease the expression of therapeutic proteins. Furthermore, naturally occurring biochemical modifications of nucleotides regulate RNA metabolism and function to modulate crucial cellular processes. Studies showing the mechanisms by which RNA modifications regulate basic cell functions in higher organisms have led to greater understanding of how aberrant RNA modification profiles can cause disease in humans. Together, these basic science discoveries have unravelled the molecular and cellular functions of RNA modifications, have provided new prospects for therapeutic manipulation and have led to a range of innovative clinical approaches. Native nucleotide modifications regulate RNA function and metabolism, the study of which has revealed disease mechanisms, offers therapeutic potential and enables innovative clinical strategies. Chemical modifications in RNA are harnessed for clinical use in stable artificial RNAs such as mRNA vaccines and synthetic small RNA molecules.
引用
收藏
页码:104 / 122
页数:19
相关论文
共 294 条
  • [1] Targeted pseudouridylation: An approach for suppressing nonsense mutations in disease genes
    Adachi, Hironori
    Pan, Yi
    He, Xueyang
    Chen, Jonathan L.
    Klein, Bart
    Platenburg, Gerard
    Morais, Pedro
    Boutz, Paul
    Yu, Yi-Tao
    [J]. MOLECULAR CELL, 2023, 83 (04) : 637 - +
  • [2] Cap-specific terminal N6-methylation of RNA by an RNA polymerase II-associated methyltransferase
    Akichika, Shinichiro
    Hirano, Seiichi
    Shichino, Yuichi
    Suzuki, Takeo
    Nishimasu, Hiroshi
    Ishitani, Ryuichiro
    Sugita, Ai
    Hirose, Yutaka
    Iwasaki, Shintaro
    Nureki, Osamu
    Suzuki, Tsutomu
    [J]. SCIENCE, 2019, 363 (6423) : 141 - 141
  • [3] N6-methyladenosine marks primary microRNAs for processing
    Alarcon, Claudio R.
    Lee, Hyeseung
    Goodarzi, Hani
    Halberg, Nils
    Tavazoie, Sohail F.
    [J]. NATURE, 2015, 519 (7544) : 482 - +
  • [4] Engineered tRNAs suppress nonsense mutations in cells and in vivo
    Albers, Suki
    Allen, Elizabeth C.
    Bharti, Nikhil
    Davyt, Marcos
    Joshi, Disha
    Perez-Garcia, Carlos G.
    Santos, Leonardo
    Mukthavaram, Rajesh
    Delgado-Toscano, Miguel Angel
    Molina, Brandon
    Kuakini, Kristen
    Alayyoubi, Maher
    Park, Kyoung-Joo Jenny
    Acharya, Grishma
    Gonzalez, Jose A.
    Sagi, Amit
    Birket, Susan E.
    Tearney, Guillermo J.
    Rowe, Steven M.
    Manfredi, Candela
    Hong, Jeong S.
    Tachikawa, Kiyoshi
    Karmali, Priya
    Matsuda, Daiki
    Sorscher, Eric J.
    Chivukula, Pad
    Ignatova, Zoya
    [J]. NATURE, 2023, 618 (7966) : 842 - +
  • [5] Antisense Oligonucleotide Therapy for the Nervous System: From Bench to Bedside with Emphasis on Pediatric Neurology
    Amanat, Man
    Nemeth, Christina L.
    Fine, Amena Smith
    Leung, Doris G.
    Fatemi, Ali
    [J]. PHARMACEUTICS, 2022, 14 (11)
  • [6] 5-METHYL CYTOSINE IN THE RNA OF ESCHERICHIA-COLI
    AMOS, H
    KORN, M
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA, 1958, 29 (02) : 444 - 445
  • [7] Dynamic m6A methylation facilitates mRNA triaging to stress granules
    Anders, Maximilian
    Chelysheva, Irina
    Goebel, Ingrid
    Trenkner, Timo
    Zhou, Jun
    Mao, Yuanhui
    Verzini, Silvia
    Qian, Shu-Bing
    Ignatova, Zoya
    [J]. LIFE SCIENCE ALLIANCE, 2018, 1 (04)
  • [8] Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation
    Anderson, Bart R.
    Muramatsu, Hiromi
    Nallagatla, Subba R.
    Bevilacqua, Philip C.
    Sansing, Lauren H.
    Weissman, Drew
    Kariko, Katalin
    [J]. NUCLEIC ACIDS RESEARCH, 2010, 38 (17) : 5884 - 5892
  • [9] N1-methylpseudouridine-incorporated mRNA outperforms pseudouridine-incorporated mRNA by providing enhanced protein expression and reduced immunogenicity in mammalian cell lines and mice
    Andries, Oliwia
    Mc Cafferty, Sean
    De Smedt, Stefaan C.
    Weiss, Ron
    Sanders, Niek N.
    Kitada, Tasuku
    [J]. JOURNAL OF CONTROLLED RELEASE, 2015, 217 : 337 - 344
  • [10] Acetylation of Cytidine in mRNA Promotes Translation Efficiency
    Arango, Daniel
    Sturgill, David
    Alhusaini, Najwa
    Dillman, Allissa A.
    Sweet, Thomas J.
    Hanson, Gavin
    Hosogane, Masaki
    Sinclair, Wilson R.
    Nanan, Kyster K.
    Mandler, Mariana D.
    Fox, Stephen D.
    Zengeya, Thomas T.
    Andresson, Thorkell
    Meier, Jordan L.
    Coller, Jeffery
    Oberdoerffer, Shalini
    [J]. CELL, 2018, 175 (07) : 1872 - +