Curvature sensing lipid dynamics in a mitochondrial inner membrane model

被引:5
作者
Golla, Vinaya Kumar [1 ,2 ]
Boyd, Kevin J. [1 ,3 ]
May, Eric R. [1 ]
机构
[1] Univ Connecticut, Dept Mol & Cell Biol, Storrs, CT 06269 USA
[2] Univ Virginia, Sch Med, Dept Cell Biol, Charlottesville, VA 22903 USA
[3] NVIDIA, 2860 County Hwy G4, Santa Clara, CA 95051 USA
基金
美国国家卫生研究院;
关键词
COARSE-GRAINED MODEL; MOLECULAR-DYNAMICS; BARTH-SYNDROME; CARDIOLIPIN; FORCE; PH; PROTEINS; PHASE;
D O I
10.1038/s42003-023-05657-6
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Membrane curvature is essential for many cellular structures and processes, and factors such as leaflet asymmetry, lipid composition, and proteins all play important roles. Cardiolipin is the signature lipid of mitochondrial membranes and is essential for maintaining the highly curved shapes of the inner mitochondrial membrane (IMM) and the spatial arrangement of membrane proteins. In this study, we investigate the partitioning behavior of various lipids present in the IMM using coarse-grained molecular dynamics simulations. This study explores curved bilayer systems containing phosphatidylcholine (PC), phosphatidylethanolamine (PE), and cardiolipin (CDL) in binary and ternary component mixtures. Curvature properties such as mean and Gaussian curvatures, as well as the distribution of lipids into the various curved regions of the cristae models, are quantified. Overall, this work represents an advance beyond previous studies on lipid curvature sensing by simulating these systems in a geometry that has the morphological features and scales of curvature consistent with regions of the IMM. We find that CDL has a stronger preference for accumulating in regions of negative curvature than PE lipids, in agreement with previous results. Furthermore, we find lipid partitioning propensity is dominated by sensitivity to mean curvature, while there is a weaker correlation with Gaussian curvature. Lipid dynamics are analyzed in a model for the mitochondrial inner membrane using coarse-grained molecular dynamics. The model displays biological scales of curvature where strong partitioning of cardiolipin to negative curvature regions is observed.
引用
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页数:13
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共 55 条
[21]   Curvature sensing by cardiolipin in simulated buckled membranes [J].
Elias-Wolff, Federico ;
Linden, Martin ;
Lyubartsev, Alexander P. ;
Brandt, Erik G. .
SOFT MATTER, 2019, 15 (04) :792-802
[22]   Anisotropic Membrane Curvature Sensing by Amphipathic Peptides [J].
Gomez-Llobregat, Jordi ;
Elias-Wolff, Federico ;
Linden, Martin .
BIOPHYSICAL JOURNAL, 2016, 110 (01) :197-204
[23]   Barth syndrome: Cellular compensation of mitochondrial dysfunction and apoptosis inhibition due to changes in cardiolipin remodeling linked to tafazzin (TAZ) gene mutation [J].
Gonzalvez, Francois ;
D'Aurelio, Marilena ;
Boutant, Marie ;
Moustapha, Aoula ;
Puech, Jean-Philippe ;
Landes, Thomas ;
Arnaune-Pelloquin, Laeticia ;
Vial, Guillaume ;
Taleux, Nellie ;
Slomianny, Christian ;
Wanders, Ronald J. ;
Houtkooper, Riekelt H. ;
Bellenguer, Pascale ;
Moller, Ian Max ;
Gottlieb, Eyal ;
Vaz, Frederic M. ;
Manfredi, Giovanni ;
Petit, Patrice X. .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 2013, 1832 (08) :1194-1206
[24]   Recent developments in membrane curvature sensing and induction by proteins [J].
Has, Chandra ;
Das, Sovan Lal .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2021, 1865 (10)
[25]   Lipids of mitochondria [J].
Horvath, Susanne E. ;
Daum, Guenther .
PROGRESS IN LIPID RESEARCH, 2013, 52 (04) :590-614
[26]   Cardiolipin and mitochondrial cristae organization [J].
Ikon, Nikita ;
Ryan, Robert O. .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2017, 1859 (06) :1156-1163
[27]   PH-DISSOCIATION CHARACTERISTICS OF CARDIOLIPIN AND ITS 2'-DEOXY ANALOG [J].
KATES, M ;
SYZ, JY ;
GOSSER, D ;
HAINES, TH .
LIPIDS, 1993, 28 (10) :877-882
[28]   Membrane Deformation under Local pH Gradient: Mimicking Mitochondrial Cristae Dynamics [J].
Khalifat, Nada ;
Puff, Nicolas ;
Bonneau, Stephanie ;
Fournier, Jean-Baptiste ;
Angelova, Miglena I. .
BIOPHYSICAL JOURNAL, 2008, 95 (10) :4924-4933
[29]   Lipid packing variations induced by pH in cardiolipin-containing bilayers: The driving force for the cristae-like shape instability [J].
Khalifat, Nada ;
Fournier, Jean-Baptiste ;
Angelova, Miglena I. ;
Puff, Nicolas .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2011, 1808 (11) :2724-2733
[30]   Monolayer spontaneous curvature of raft-forming membrane lipids [J].
Kollmitzer, Benjamin ;
Heftberger, Peter ;
Rappolt, Michael ;
Pabst, Georg .
SOFT MATTER, 2013, 9 (45) :10877-10884