Metagenomics reveals N-induced changes in carbon-degrading genes and microbial communities of tea (Camellia sinensis L.) plantation soil under long-term fertilization

被引:30
作者
Yang, Xiangde [1 ]
Ni, Kang [1 ]
Shi, Yuanzhi [1 ]
Yi, Xiaoyun [1 ]
Ji, Lingfei [2 ]
Wei, Sirou [1 ]
Jiang, Yanyan [1 ]
Zhang, Yongli [1 ]
Cai, Yanjiang [3 ]
Ma, Qingxu [4 ]
Tang, Sheng [4 ]
Ma, Lifeng [1 ]
Ruan, Jianyun [1 ]
机构
[1] Chinese Acad Agr Sci, Tea Res Inst, Key Lab Tea Biol & Resource Utilizat Tea, Minist Agr, Hangzhou 310008, Peoples R China
[2] Nanjing Agr Univ, Jiangsu Prov Key Lab Organ Solid Waste Utilizat, Nanjing 210095, Peoples R China
[3] Zhejiang A&F Univ, State Key Lab Subtrop Silviculture, Hangzhou 311300, Peoples R China
[4] Zhejiang Univ, Coll Environm & Resource Sci, Zhejiang Prov Key Lab Agr Resources & Environm, Hangzhou 310058, Peoples R China
基金
中国国家自然科学基金;
关键词
N application; C -cycling genes; SOC-degrading enzymes; Functional microbial communities; Acidic soil; Tea plantation; NITROGEN-FERTILIZATION; DIVERSITY; RESPONSES; IMPACTS; STORAGE;
D O I
10.1016/j.scitotenv.2022.159231
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Soil organic carbon (SOC) is an important C pool of the global ecosystem and is affected by various agricultural prac-tices including fertilization. Excessive nitrogen (N) application is an important field management measure in tea plan-tation systems. However, the mechanism underlying the impact of N fertilization on SOC, especially the microscopic mechanism remain unclear. The present study explored the effects of N fertilization on C-cycling genes, SOC-degrading enzymes and microbes expressing these enzymes by using a metagenomic approach in a tea plantation under long-term fertilization with different N rates. Results showed that N application significantly changed the abun-dance of C-cycling genes, SOC-degrading enzymes, especially those associated with labile and recalcitrant C degrada-tion. In addition, the beta-glucosidase and chitinase-expressing microbial communities showed a significant difference under different N rates. At the phylum level, microbial taxa involved in C degradation were highly similar and abun-dant, while at the genus level, only specific taxa performed labile and recalcitrant C degradation; these SOC-degrading microbes were significantly enriched under N application. Redundancy analysis (RDA) revealed that the soil and pruned litter properties greatly influenced the SOC-degrading communities; pH and DOC of the soil and biomass and total polyphenol (TP) of the pruned litter exerted significant effects. Additionally, the random forest (RF) algo-rithm revealed that soil pH and dominant taxa efficiently predicted the beta-glucosidase abundance, while soil pH and DOC, pruned litter TP, and the highly abundant microbial taxa efficiently predicted chitinase abundance. Our study indicated that long-term N fertilization exerted a significant positive effect on SOC-degrading enzymes and mi-crobes expressing these enzymes, resulting in potential impact on soil C storage in a perennial tea plantation ecosys-tem.
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页数:11
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共 53 条
  • [1] Modelling tillage and nitrogen fertilization effects on soil organic carbon dynamics
    Alvaro-Fuentes, Jorge
    Joaquin Morel, Francisco
    Plaza-Bonilla, Daniel
    Luis Arrue, Jose
    Cantero-Martinez, Carlos
    [J]. SOIL & TILLAGE RESEARCH, 2012, 120 : 32 - 39
  • [2] Adaptation of microorganisms to cold temperatures, weak acid preservatives, low pH, and osmotic stress: A review
    Beales, N
    [J]. COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY, 2004, 3 (01): : 1 - 20
  • [3] Plant-borne flavonoids released into the rhizosphere: impact on soil bio-activities related to plant nutrition. A review
    Cesco, S.
    Mimmo, T.
    Tonon, G.
    Tomasi, N.
    Pinton, R.
    Terzano, R.
    Neumann, G.
    Weisskopf, L.
    Renella, G.
    Landi, L.
    Nannipieri, P.
    [J]. BIOLOGY AND FERTILITY OF SOILS, 2012, 48 (02) : 123 - 149
  • [4] A keystone microbial enzyme for nitrogen control of soil carbon storage
    Chen, Ji
    Luo, Yiqi
    van Groenigen, Kees Jan
    Hungate, Bruce A.
    Cao, Junji
    Zhou, Xuhui
    Wang, Rui-wu
    [J]. SCIENCE ADVANCES, 2018, 4 (08):
  • [5] Soil bacterial taxonomic diversity is critical to maintaining the plant productivity
    Chen, Qing-Lin
    Ding, Jing
    Zhu, Yong-Guan
    He, Ji-Zheng
    Hu, Hang-Wei
    [J]. ENVIRONMENT INTERNATIONAL, 2020, 140
  • [6] Warming enhances old organic carbon decomposition through altering functional microbial communities
    Cheng, Lei
    Zhang, Naifang
    Yuan, Mengting
    Xiao, Jing
    Qin, Yujia
    Deng, Ye
    Tu, Qichao
    Xue, Kai
    Van Nostrand, Joy D.
    Wu, Liyou
    He, Zhili
    Zhou, Xuhui
    Leigh, Mary Beth
    Konstantinidis, Konstantinos T.
    Schuur, Edward A. G.
    Luo, Yiqi
    Tiedje, James M.
    Zhou, Jizhong
    [J]. ISME JOURNAL, 2017, 11 (08) : 1825 - 1835
  • [7] Role of cultural and nutrient management practices in carbon sequestration in agricultural soil
    Chowdhury, Saikat
    Bolan, Nanthi
    Farrell, Mark
    Sarkar, Binoy
    Sarker, Jharna Rani
    Kirkham, Mary Beth
    Hossain, Md Zahangir
    Kim, Geon-Ha
    [J]. ADVANCES IN AGRONOMY, VOL 166, 2021, 166 : 131 - 196
  • [8] Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils
    Crump, Byron C.
    Amaral-Zettler, Linda A.
    Kling, George W.
    [J]. ISME JOURNAL, 2012, 6 (09) : 1629 - 1639
  • [9] Metagenomic insights into soil microbial communities involved in carbon cycling along an elevation climosequences
    Dai, Zhongmin
    Zang, Huadong
    Chen, Jie
    Fu, Yingyi
    Wang, Xuehua
    Liu, Huaiting
    Shen, Congcong
    Wang, Jianjun
    Kuzyakov, Yakov
    Becker, Joscha N.
    Hemp, Andreas
    Barberan, Albert
    Gunina, Anna
    Chen, Huaihai
    Luo, Yu
    Xu, Jianming
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2021, 23 (08) : 4631 - 4645
  • [10] The effects of the soil environment on soil organic carbon in tea plantations in Xishuangbanna, southwestern China
    Di, Sun
    Zong, Mingming
    Li, Shiyu
    Li, Haixia
    Duan, Changqun
    Peng, Changhui
    Zhao, Yonggui
    Bai, Jinyue
    Lin, Chen
    Feng, Yuan
    Huang, Wuping
    Wang, Di
    [J]. AGRICULTURE ECOSYSTEMS & ENVIRONMENT, 2020, 297