Analysis of the characteristics of immune infiltration in endometrial carcinoma and its relationship with prognosis based on bioinformatics

被引:2
|
作者
Lin, Yao [1 ]
Liu, Songyi [2 ]
Lin, Chunlin [2 ]
Lin, Penghang [2 ]
Teng, Zuhong [2 ]
Zhu, Guangwei [2 ]
机构
[1] Fujian Med Univ, Hosp 1, Dept Obstet & Gynecol, Fuzhou, Peoples R China
[2] Fujian Med Univ, Hosp 1, Dept Gastrointestinal Surg Sect 2, Fuzhou, Peoples R China
关键词
bioinformatics; endometrial carcinoma; immune; prognosis; CANCER; REVEALS;
D O I
10.1097/MD.0000000000034156
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
To explore immune-related molecules that affect the prognosis of endometrial carcinoma (EC) using bioinformatic data mining. The expression data related to EC were downloaded from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus databases. After differential expression analysis, the intersection with immune related genes in the ImmPort database was used to obtain immune related differentially expressed genes (IRDEGs). The correlation between clinicopathological information and the prognosis of IRDEGs was further analyzed to obtain prognosis related differentially expressed immune genes (PRDEIG). Gene correlation analysis and Gene Set Enrichment Analysis (GSEA) enrichment analysis showed that PRDEIG was enriched in cancer-related functional pathways. We then analyzed the relationship between PRDEIG and immune cell infiltration, and further analyzed the mRNA and protein expression of PRDEIG in EC using TCGA and the human protein expression atlas (THPA) databases. After the intersection of the differential expression analysis results and immune-related genes, 4 IRDEGs were obtained: osteoglycin (OGN), LTBP4, CXCL12, and SPP1. After analyzing the relationship between 4 IRDEGs and clinicopathological parameters and prognosis of patients with EC, revealed that only OGN was not only related to tumor immunity, but also affected the prognosis of patients with EC. Gene correlation and GSEA enrichment of OGN were analyzed. The results showed that OGN was significantly enriched in 6 functional pathways: epithelial mesenchymal transition, KRAS signaling up, myogenesis, UV response, allograft rejection and apical junction. In addition, it was also found that OGN was significantly correlated with a variety of immune cells. The results of TCGA and THPA database showed that the mRNA and protein expression levels of OGN decreased in EC. OGN may affect the epithelial mesenchymal transformation (EMT) of tumor by affecting the infiltration of tumor immune cells.
引用
收藏
页数:8
相关论文
共 50 条
  • [1] Bioinformatics analysis of necroptosis-related lncRNAs and immune infiltration, and prediction of the prognosis of patients with esophageal carcinoma
    Duan, Xiaoyang
    Du, Huazhen
    Yuan, Meng
    Liu, Lie
    Liu, Rongfeng
    Shi, Jian
    EXPERIMENTAL AND THERAPEUTIC MEDICINE, 2023, 26 (01)
  • [2] DNAJB11 predicts a poor prognosis and is associated with immune infiltration in thyroid carcinoma: a bioinformatics analysis
    Sun, Rongxin
    Yang, Longyan
    Wang, Yan
    Zhang, Yuanyuan
    Ke, Jing
    Zhao, Dong
    JOURNAL OF INTERNATIONAL MEDICAL RESEARCH, 2021, 49 (11)
  • [3] The bioinformatics and experimental analysis of AlkB family for prognosis and immune cell infiltration in hepatocellular carcinoma
    Peng, Bi
    Yan, Yuanliang
    Xu, Zhijie
    PEERJ, 2021, 9
  • [4] High MutS homolog 2 expression predicts poor prognosis and is related to immune infiltration in endometrial carcinoma
    Lu, Xiaoqin
    Ying, Yanqi
    Zhang, Wenyi
    Li, Rui
    Zhang, Jingyan
    CELL BIOLOGY INTERNATIONAL, 2023, 47 (01) : 201 - 215
  • [5] Correlation Analysis of Immune Cell Infiltration in Recurrent Endometrial Carcinoma
    Wang, Wenzhi
    Liu, Xiaoying
    Zheng, Lei
    JOURNAL OF BIOMEDICAL NANOTECHNOLOGY, 2023, 19 (07) : 1239 - 1246
  • [6] PTEN mutation: A potential prognostic factor associated with immune infiltration in endometrial carcinoma
    Tao, Ye
    Liang, Bin
    PATHOLOGY RESEARCH AND PRACTICE, 2020, 216 (06)
  • [7] Integrated bioinformatics analysis of differentially expressed genes and immune cell infiltration characteristics in Esophageal Squamous cell carcinoma
    Feng, Zitong
    Qu, Jingge
    Liu, Xiao
    Liang, Jinghui
    Li, Yongmeng
    Jiang, Jin
    Zhang, Huiying
    Tian, Hui
    SCIENTIFIC REPORTS, 2021, 11 (01)
  • [8] Analysis of Nucleoporin 107 Overexpression and Its Association with Prognosis and Immune Infiltration in Lung Adenocarcinoma by Bioinformatics Methods
    Li, Zi-Hao
    Li, Jia-Yi
    Zhu, Yong-Jie
    Dai, Lei
    Wu, Zuo-Tao
    Nong, Ju-Sen
    Zhuo, Ting
    Li, Fu-Lu
    He, Ling-Yun
    Liang, Hong -Hua
    Zang, Feng-Ling
    Wang, Yong-Yong
    Chen, Ming -Wu
    Huang, Wei-Jia
    Cao, Jian-Bin
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2023, 16 : 5449 - 5465
  • [9] Periostin is associated with prognosis and immune cell infiltration in pancreatic adenocarcinoma based on integrated bioinformatics analysis
    Chen, Yijun
    Zhang, Fengyu
    Zhang, Bolin
    Trojanowicz, Bogusz
    Haemmerle, Monika
    Kleeff, Joerg
    Sunami, Yoshiaki
    CANCER REPORTS, 2024, 7 (02)
  • [10] Analysis of the Prognosis Prediction Ability of a Necroptosis-Related Gene Signature and its Relationship With the Hepatocellular Carcinoma Immune Microenvironment Using Bioinformatics Analysis and Experimental Validation
    Guan, Renguo
    Mei, Jie
    Guo, Rongping
    TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2023, 22