The complete mitochondrial genome of Hypseleotris cyprinoides (Perciformes: eleotridae)

被引：0

作者：

Pan, Zhongchao ^{[1
]}

Ruan, Xinhe ^{[2
]}

Cheng, Huitao ^{[2
]}

Zhang, Chunli ^{[2
]}

Zhao, Huihong ^{[2
,3
]}

机构：

[1] Guangdong Weilai Biotechnol Co Ltd, Guangzhou, Peoples R China

[2] South China Agr Univ, Coll Marine Sci, Guangzhou, Peoples R China

[3] South China Agr Univ, Coll Marine Sci, Guangzhou 510642, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 04期

基金：

中国国家自然科学基金;

关键词：

Mitochondrial genome; Hypseleotris cyprinoides; phylogenetic analysis; HIGHER TELEOSTEAN PHYLOGENIES; DNA SEQUENCE;

D O I：

10.1080/23802359.2023.2197085

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

In this study, we obtained the complete mitochondrial genome of Hypseleotris cyprinoides, which was 16520 bp in length. The mitogenome contained 37 genes, including the typical set of 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 Ribosomal RNA (rRNA) genes. A, C, G, and T distribution was 28.57%, 29.91%, 16.99%, and 24.53%, respectively. The length of the total protein-coding genes was 11441 bp, which accounts for 66.80% of the whole mitochondrial genome. The Maximum Likelihood (ML) phylogenetic analysis based on the concatenated nucleotide sequences of 13 PCGs showed that H.cyprinoides as a sister species to Hypseleotris klunzingeri was clustered in the family Hypseleotris. The discovery of the complete mitochondrial genome of H.cyprinoides would help to conduct in-depth research on Hypseleotris.

引用

页码：488 / 492

页数：5

共 16 条

[1] Complete mitochondrial genome and assembled DNA barcoding analysis of Lutjanus fulgens (Valenciennes, 1830) and its comparison with other Lutjanus species [J].

Afriyie, Gyamfua ;

Wang, Zhongduo ;

Dong, Zhongdian ;

Ayisi Larbi, Christian ;

Asiedu, Berchie ;

Guo, Yusong .

ECOLOGY AND EVOLUTION, 2020, 10 (15) :7971-7980

[2] Complete mitogenome sequences of the pacific red snapper (Lutjanus peru) and the spotted rose snapper (Lutjanus gutattus) [J].

Juliana Bayona-Vasquez, Natalia ;

Alejandro Hernandez-Alvarez, Cristobal ;

Glenn, Travis ;

Dominguez-Dominguez, Omar ;

Uribe-Alcocer, Manuel ;

Diaz-Jaimes, Pindaro .

MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) :223-224

[3] MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms [J].

Kumar, Sudhir ;

Stecher, Glen ;

Li, Michael ;

Knyaz, Christina ;

Tamura, Koichiro .

MOLECULAR BIOLOGY AND EVOLUTION, 2018, 35 (06) :1547-1549

[4] The complete mitochondrial genome of Eleotris oxycephala (Perciformes: Eleotridae) [J].

Meng, Yongyong ;

Ma, Hongyu ;

Ma, Chunyan ;

Wei, Hongqing ;

Liu, Yuexing ;

Zhang, Fengying ;

Wang, Wei ;

Chen, Wei ;

Zhao, Mengdi ;

Chen, Fenfang ;

Ma, Lingbo .

MITOCHONDRIAL DNA PART A, 2016, 27 (05) :3820-3821

[5] Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences [J].

Miya, M ;

Takeshima, H ;

Endo, H ;

Ishiguro, NB ;

Inoue, JG ;

Mukai, T ;

Satoh, TP ;

Yamaguchi, M ;

Kawaguchi, A ;

Mabuchi, K ;

Shirai, SM ;

Nishida, M .

MOLECULAR PHYLOGENETICS AND EVOLUTION, 2003, 26 (01) :121-138

[6] Mitogenomic exploration of higher teleostean phylogenies: A case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences [J].

Miya, M ;

Kawaguchi, A ;

Nishida, M .

MOLECULAR BIOLOGY AND EVOLUTION, 2001, 18 (11) :1993-2009

[7] The complete mitochondrial genome of Siniperca fortis (Perciformes: Sinipercidae) [J].

Peng Min ;

Zhu Weilin ;

Zeng Digang ;

Yang Chunling ;

Chen Xiuli .

MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02) :1857-1858

[8] The complete mitochondrial genome of the southern purple- spotted gudgeon Mogurnda adspersa ( Perciformes: Eleotridae) through pyrosequencing [J].

Perini, Violeta da Rocha ;

de Carvalho, Daniel Cardoso ;

Beheregaray, Luciano Bellagamba ;

Prosdocimi, Francisco .

MITOCHONDRIAL DNA PART A, 2016, 27 (01) :380-382

[9] Complete mitogenomes of five ecologically diverse Australian freshwater fishes [J].

Schmidt, Daniel J. ;

McDougall, Carmel .

MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :191-193

[10] Complete mitochondrial genome of the double-lined fusileer,Pterocaesio digramma(Perciformes, Caesionidae): mitogenome characterization and phylogenetic analysis [J].

Song, Ha Yeun ;

Jung, Yun-Hwan ;

Kim, Bora ;

Choi, Young Ji ;

Nguyen, Tu Van ;

Lee, Dae-Sung .

MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03) :2617-2618

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