Exploration of Experimental, Theoretical, Molecular Docking, and Electronic Excitation Studies of Carboxylate-Appended (2-Pyridyl)Alkylamine Ligand

被引:5
作者
Kaur, Pawanjeet [1 ]
Verma, Indresh [2 ]
Khanum, Ghazala [3 ]
Ali, Akram [4 ]
Siddiqui, Nazia [5 ]
Javed, Saleem [6 ]
Arora, Himanshu [7 ]
机构
[1] GD Goenka Univ, Sch Engn & Sci, Gurugram, India
[2] Indian Inst Technol Kanpur, Dept Chem, Kanpur, India
[3] Jiwaji Univ, SOS Chem, Gwalior, India
[4] Univ Allahabad, CMP Coll, Dept Chem, Prayagraj, India
[5] Dayalbagh Educ Inst, Dept Chem, Agra, India
[6] Jamia Milia Univ, Fac Nat Sci, Dept Chem, Delhi, India
[7] Univ Allahabad, Fac Sci, Dept Chem, Prayagraj, India
关键词
(2-Pyridyl) alkylamine ligand; optimization; vibrational analysis; TDDFT; MEP; molecular docking; DENSITY-FUNCTIONAL THEORY; COORDINATION POLYMERS; SUPRAMOLECULAR ISOMERISM; NBO ANALYSIS; LINE-SHAPES; FT-RAMAN; DFT; COMPLEXES; APOPTOSIS; MAGNETISM;
D O I
10.1080/10406638.2023.2224490
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
'In this study, we employed density functional theory (DFT)/B3LYP method with a 6-311++G(d,p) basis set to analyze the infrared and UV spectra of a carboxylate-appended (2-pyridyl)alkylamine ligand. The FT-IR spectra were recorded within the range of 4000-500 cm-1. Geometrical parameters, energies, and wavenumbers were determined, and the fundamental vibrations were assigned based on the potential energy distribution (PED) of the vibrational modes. The UV spectrum of the compound was measured in various solvents, namely DMSO, CHCl3, and CH3OH. The H-1-NMR shifts were estimated using the GIAO method, and the results were compared to experimental spectra. To further investigate the electronic properties, including excitation energies, absorption wavelengths, and highest occupied molecular orbital (HOMO)-lowest unoccupied molecular orbital (LUMO) energies, we employed the DFT/B3LYP approach. The degree of electron localization was assessed through analysis of the ELF diagram. Additionally, a molecular electrostatic potential (MEP) was generated, and a 3-D color representation was utilized to visualize reactive sites. Lastly, a biological study involving molecular docking was conducted using six different receptors in order to identify optimal ligand-protein interactions and assess drug similarities.'
引用
收藏
页码:2802 / 2819
页数:18
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