IDH1 mutation is detectable in plasma cell-free DNA and is associated with survival outcome in glioma patients

被引:3
|
作者
Crucitta, Stefania [1 ]
Pasqualetti, Francesco [2 ,3 ]
Gonnelli, Alessandra [2 ]
Ruglioni, Martina [1 ]
Luculli, Giovanna Irene [1 ]
Cantarella, Martina [2 ]
Ortenzi, Valerio [4 ]
Scatena, Cristian [4 ]
Paiar, Fabiola [2 ]
Naccarato, Antonio Giuseppe [4 ]
Danesi, Romano [1 ,5 ]
Del Re, Marzia [1 ]
机构
[1] Univ Pisa, Dept Clin & Expt Med, Unit Clin Pharmacol & Pharmacogenet, Pisa, Italy
[2] Univ Pisa, Dept Med & Oncol, Radiat Oncol, Pisa, Italy
[3] Univ Oxford, Dept Oncol, Oxford, England
[4] Univ Pisa, Dept Translat Res & New Technol Med & Surg, Div Pathol, Pisa, Italy
[5] Univ Milan, Dept Oncol & Hematooncol, Via Festa Perdono 7, I-20122 Milan, Italy
关键词
Liquid biopsy; cfDNA; IDH1; Glioma; CIRCULATING TUMOR DNA; CENTRAL-NERVOUS-SYSTEM; LIQUID BIOPSY; CLASSIFICATION; BIOMARKERS; CTDNA;
D O I
10.1186/s12885-023-11726-0
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background Circulating cell-free DNA (cfDNA, liquid biopsy) is a powerful tool to detect molecular alterations. However, depending on tumor characteristics, biology and anatomic localization, cfDNA detection and analysis may be challenging. Gliomas are enclosed into an anatomic sanctuary, which obstacles the release of cfDNA into the peripheral blood. Therefore, the advantages of using liquid biopsy for brain tumors is still to be confirmed. The present study evaluates the ability of liquid biopsy to detect IDH1 mutations and its correlation with survival and clinical characteristics of glioma patients.Methods Blood samples obtained from glioma patients were collected after surgery prior to the adjuvant therapy. cfDNA was extracted from plasma and IDH1 p.R132H mutation analysis was performed on a digital droplet PCR. chi 2-test and Cohen k were used to assess the correlation between plasma and tissue IDH1 status, while Kaplan Meier curve and Cox regression analysis were applied to survival analysis. Statistical calculations were performed by MedCalc and GraphPad Prism software.Results A total of 67 samples were collected. A concordance between IDH1 status in tissue and in plasma was found (p = 0.0024), and the presence of the IDH1 mutation both in tissue (138.8 months vs 24.4, p < 0.0001) and cfDNA (116.3 months vs 35.8, p = 0.016) was associated with longer median OS. A significant association between IDH1 mutation both in tissue and cfDNA, age, tumor grade and OS was demonstrated by univariate Cox regression analysis. No statistically significant association between IDH1 mutation and tumor grade was found (p = 0.10).Conclusions The present study demonstrates that liquid biopsy may be used in brain tumors to detect IDH1 mutation which represents an important prognostic biomarker in patients with different types of gliomas, being associated to OS.
引用
收藏
页数:10
相关论文
共 50 条
  • [21] IDH1 mutation activates mTOR signaling pathway, promotes cell proliferation and invasion in glioma cells
    Timucin Avsar
    Tansu Bilge Kose
    Muhammed Deniz Oksal
    Gizem Turan
    Turker Kilic
    Molecular Biology Reports, 2022, 49 : 9241 - 9249
  • [22] IDH1 mutation-associated long non-coding RNA expression profile changes in glioma
    Xiao-Qin Zhang
    Karrie Mei-Yee Kiang
    Yue-Chun Wang
    Jenny Kan-Suen Pu
    Amy Ho
    Stephen Yin Cheng
    Derek Lee
    Ping-De Zhang
    Jia-Jing Chen
    Wai-Man Lui
    Ching-Fai Fung
    Gilberto Ka-Kit Leung
    Journal of Neuro-Oncology, 2015, 125 : 253 - 263
  • [23] Feasibility of monitoring advanced melanoma patients using cell-free DNA from plasma
    Gangadhar, Tara C.
    Savitch, Samantha L.
    Yee, Stephanie S.
    Xu, Wei
    Huang, Alexander C.
    Harmon, Shannon
    Lieberman, David B.
    Soucier, Devon
    Fan, Ryan
    Black, Taylor A.
    Morrissette, Jennifer J. D.
    Salathia, Neeraj
    Waters, Jill
    Zhang, Shile
    Toung, Jonathan
    van Hummelen, Paul
    Fan, Jian-Bing
    Xu, Xiaowei
    Amaravadi, Ravi K.
    Schuchter, Lynn M.
    Karakousis, Giorgos C.
    Hwang, Wei-Ting
    Carpenter, Erica L.
    PIGMENT CELL & MELANOMA RESEARCH, 2018, 31 (01) : 73 - 81
  • [24] High Cell-Free DNA Integrity Is Associated with Poor Breast Cancer Survival
    Lamminaho, Maria
    Kujala, Jouni
    Peltonen, Hanna
    Tengstrom, Maria
    Kosma, Veli-Matti
    Mannermaa, Arto
    CANCERS, 2021, 13 (18)
  • [25] Liquid biopsy with multiplex ligation-dependent probe amplification targeting cell-free tumor DNA in cerebrospinal fluid from patients with adult diffuse glioma
    Otsuji, Ryosuke
    Fujioka, Yutaka
    Hata, Nobuhiro
    Kuga, Daisuke
    Sangatsuda, Yuhei
    Takigawa, Kosuke
    Funakoshi, Yusuke
    Sako, Aki
    Yamamoto, Hidetaka
    Nakamizo, Akira
    Mizoguchi, Masahiro
    Yoshimoto, Koji
    NEURO-ONCOLOGY ADVANCES, 2023, 5 (01)
  • [26] IDH2 compensates for IDH1 mutation to maintain cell survival under hypoxic conditions in IDH1-mutant tumor cells
    Zhang, Yao
    Lv, Weifeng
    Li, Qi
    Wang, Qinhao
    Ru, Yi
    Xiong, Xin
    Yan, Fengqi
    Pan, Tao
    Lin, Wei
    Li, Xia
    MOLECULAR MEDICINE REPORTS, 2019, 20 (02) : 1893 - 1900
  • [27] IDH1 mutation-associated long non-coding RNA expression profile changes in glioma
    Zhang, Xiao-Qin
    Kiang, Karrie Mei-Yee
    Wang, Yue-Chun
    Pu, Jenny Kan-Suen
    Ho, Amy
    Cheng, Stephen Yin
    Lee, Derek
    Zhang, Ping-De
    Chen, Jia-Jing
    Lui, Wai-Man
    Fung, Ching-Fai
    Leung, Gilberto Ka-Kit
    JOURNAL OF NEURO-ONCOLOGY, 2015, 125 (02) : 253 - 263
  • [28] Cell-free DNA in the plasma of patients with systemic sclerosis
    Marta Mosca
    Tiziana Giuliano
    Giovanna Cuomo
    Marica Doveri
    Chiara Tani
    Michele Curcio
    Giuseppina Abignano
    Francesca De Feo
    Laura Bazzichi
    Alessandra Della Rossa
    Gabriele Valentini
    Stefano Bombardieri
    Clinical Rheumatology, 2009, 28 : 1437 - 1440
  • [29] Aberrant methylation of cell-free circulating DNA in plasma predicts poor outcome in diffuse large B cell lymphoma
    Kristensen, Lasse Sommer
    Hansen, Jakob Werner
    Kristensen, Soren Sommer
    Tholstrup, Dorte
    Harslof, Laurine Bente Schram
    Pedersen, Ole Birger
    Brown, Peter De Nully
    Gronbaek, Kirsten
    CLINICAL EPIGENETICS, 2016, 8
  • [30] Cell-free DNA in the plasma of patients with systemic sclerosis
    Mosca, Marta
    Giuliano, Tiziana
    Cuomo, Giovanna
    Doveri, Marica
    Tani, Chiara
    Curcio, Michele
    Abignano, Giuseppina
    De Feo, Francesca
    Bazzichi, Laura
    Della Rossa, Alessandra
    Valentini, Gabriele
    Bombardieri, Stefano
    CLINICAL RHEUMATOLOGY, 2009, 28 (12) : 1437 - 1440