A comprehensive review of the deep learning-based tumor analysis approaches in histopathological images: segmentation, classification and multi-learning tasks

被引:11
作者
Abdel-Nabi, Heba [1 ]
Ali, Mostafa [2 ]
Awajan, Arafat [1 ,3 ]
Daoud, Mohammad [4 ]
Alazrai, Rami [4 ]
Suganthan, Ponnuthurai N. [5 ,6 ]
Ali, Talal [7 ]
机构
[1] Princess Sumaya Univ Technol, Dept Comp Sci, Amman 11941, Jordan
[2] Jordan Univ Sci & Technol, Fac Comp & Informat Technol, Irbid, Jordan
[3] Mutah Univ, Comp Sci Dept, Al Karak 61710, Jordan
[4] German Jordanian Univ, Dept Comp Engn, Amman, Jordan
[5] Qatar Univ, Coll Engn, KINDI Ctr Comp Res, Doha, Qatar
[6] Nanyang Technol Univ, Sch Elect & Elect Engn, Singapore 639798, Singapore
[7] Wayne State Univ, Detroit, MI USA
来源
CLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS | 2023年 / 26卷 / 05期
关键词
Computer-aided diagnosis; Digital pathology; Histopathological images; Medical image segmentation; Medical image classification; Whole-slide images; WHOLE-SLIDE IMAGES; CANCER; NETWORKS; DECODER; IMPACT;
D O I
10.1007/s10586-022-03951-2
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Medical Imaging has become a vital technique that has been embraced in the diagnosis and treatment process of cancer. Histopathological slides, which microscopically examine the suspicious tissue, are considered the golden standard for tumor prognosis and diagnosis. This excellent performance caused a sudden and growing interest in digitizing these slides to generate Whole Slide Images (WSI). However, analyzing WSI is a very challenging task due to the multiple-resolution, large-scale nature of these images. Therefore, WSI-based Computer-Aided Diagnosis (CAD) analysis gains increasing attention as a secondary decision support tool to enhance healthcare by alleviating pathologists' workload and reducing misdiagnosis rates. Recent revolutionized deep learning techniques are promising and have the potential to achieve efficient automatic representation of WSI features in a data-driven manner. Thus, in this survey, we focus mainly on deep learning-based CAD systems in the context of tumor analysis in histopathological images, i.e., segmentation and classification of tumor regions. We present a visual taxonomy of deep learning approaches that provides a systematic structure to the vast number of diverse models proposed until now. We sought to identify challenges that face the automation of histopathological analysis, the commonly used public datasets, and evaluation metrics and discuss recent methodologies for addressing them through a systematic examination of presented deep solutions. The survey aims to highlight the existing gaps and limitations of the recent deep learning-based WSI approaches to explore the possible avenues for potential enhancements.
引用
收藏
页码:3145 / 3185
页数:41
相关论文
共 119 条
[11]   Glandular Morphometrics for Objective Grading of Colorectal Adenocarcinoma Histology Images [J].
Awan, Ruqayya ;
Sirinukunwattana, Korsuk ;
Epstein, David ;
Jefferyes, Samuel ;
Qidwai, Uvais ;
Aftab, Zia ;
Mujeeb, Imaad ;
Snead, David ;
Rajpoot, Nasir .
SCIENTIFIC REPORTS, 2017, 7 :2220-2243
[12]   Role of AI and Histopathological Images in Detecting Prostate Cancer: A Survey [J].
Ayyad, Sarah M. ;
Shehata, Mohamed ;
Shalaby, Ahmed ;
Abou El-Ghar, Mohamed ;
Ghazal, Mohammed ;
El-Melegy, Moumen ;
Abdel-Hamid, Nahla B. ;
Labib, Labib M. ;
Ali, H. Arafat ;
El-Baz, Ayman .
SENSORS, 2021, 21 (08)
[13]  
Bancroft J D., 2013, Bancrofts Theory Practice Histological Techniques, P173, DOI [DOI 10.1016/B978-0-7020-4226-3.00010-X, 10.1016/b978-0-7020-4226-3.00010-x, 10.1016/B978-0-7020-4226-3.00010-X]
[14]   Resolution-agnostic tissue segmentation in whole-slide histopathology images with convolutional neural networks [J].
Bandi, Peter ;
Balkenhol, Maschenka ;
van Ginneken, Bram ;
van der Laak, Jeroen ;
Litjens, Geert .
PEERJ, 2019, 7
[15]   Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer [J].
Bejnordi, Babak Ehteshami ;
Veta, Mitko ;
van Diest, Paul Johannes ;
van Ginneken, Bram ;
Karssemeijer, Nico ;
Litjens, Geert ;
van der Laak, Jeroen A. W. M. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2017, 318 (22) :2199-2210
[16]   Predicting Cancer with a Recurrent Visual Attention Model for Histopathology Images [J].
BenTaieb, Aicha ;
Hamarneh, Ghassan .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2018, PT II, 2018, 11071 :129-137
[17]   A Deep Learning Approach for Breast Invasive Ductal Carcinoma Detection and Lymphoma Multi-Classification in Histological Images [J].
Brancati, Nadia ;
De Pietro, Giuseppe ;
Frucci, Maria ;
Riccio, Daniel .
IEEE ACCESS, 2019, 7 :44709-44720
[18]   Encoder-Decoder with Atrous Separable Convolution for Semantic Image Segmentation [J].
Chen, Liang-Chieh ;
Zhu, Yukun ;
Papandreou, George ;
Schroff, Florian ;
Adam, Hartwig .
COMPUTER VISION - ECCV 2018, PT VII, 2018, 11211 :833-851
[19]  
CHOLLET F, 2017, PROC CVPR IEEE, P1800, DOI DOI 10.1109/CVPR.2017.195
[20]   High-throughput adaptive sampling for whole-slide histopathology image analysis (HASHI) via convolutional neural networks: Application to invasive breast cancer detection [J].
Cruz-Roa, Angel ;
Gilmore, Hannah ;
Basavanhally, Ajay ;
Feldman, Michael ;
Ganesan, Shridar ;
Shih, Natalie ;
Tomaszewski, John ;
Madabhushi, Anant ;
Gonzalez, Fabio .
PLOS ONE, 2018, 13 (05)