Structural Modifications and Novel Protein-Binding Sites in Pre-miR-675-Explaining Its Regulatory Mechanism in Carcinogenesis

被引:4
作者
Dey, Abhishek [1 ]
机构
[1] Natl Inst Pharmaceut Educ & Res NIPER R Raebareli, Dept Biotechnol, Lucknow 226002, India
关键词
pre-miR-675; H19; lncRNA; miRNA; SHAPE assay; interactome; carcinogenesis; tumours; LONG NONCODING RNA; PARTITION-FUNCTION; PRIMER EXTENSION; H19; MIR-675; SHAPE; PROLIFERATION; CONTRIBUTES; REPRESSION; MICRORNAS;
D O I
10.3390/ncrna9040045
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pre-miR-675 is a microRNA expressed from the exon 1 of H19 long noncoding RNA, and the atypical expression of pre-miR-675 has been linked with several diseases and disorders including cancer. To execute its function inside the cell, pre-miR-675 is folded into a particular conformation, which aids in its interaction with several other biological molecules. However, the exact folding dynamics of pre-miR-675 and its protein-binding motifs are currently unknown. Moreover, how H19 lncRNA and pre-miR-675 crosstalk and modulate each other's activities is also unclear. The detailed structural analysis of pre-miR-675 in this study determines its earlier unknown conformation and identifies novel protein-binding sites on pre-miR-675, thus making it an excellent therapeutic target against cancer. Co-folding analysis between H19 lncRNA and pre-miR-675 determine structural transformations in pre-miR-675, thus describing the earlier unknown mechanism of interaction between these two molecules. Comprehensively, this study details the conformation of pre-miR-675 and its protein-binding sites and explains its relationship with H19 lncRNA, which can be interpreted to understand the role of pre-miR-675 in the development and progression of tumorigenesis and designing new therapeutics against cancers.
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页数:14
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