Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients

被引:4
作者
Helio, Krista [1 ,2 ]
Cicerchia, Marcos [3 ]
Hathaway, Julie [4 ]
Tommiska, Johanna [3 ]
Huusko, Johanna [3 ]
Saarinen, Inka [3 ]
Koskinen, Lotta [3 ]
Muona, Mikko [3 ]
Kytola, Ville
Djupsjobacka, Janica [3 ]
Gentile, Massimiliano [3 ]
Salmenpera, Pertteli [3 ]
Alastalo, Tero-Pekka [4 ]
Steinberg, Christian [5 ]
Helio, Tiina [1 ,2 ]
Paananen, Jussi [3 ]
Myllykangas, Samuel [3 ]
Koskenvuo, Juha [3 ]
机构
[1] Univ Helsinki, Heart & Lung Ctr, ERN GUARD Heart Ctr, Helsinki, Finland
[2] Univ Helsinki, Cent Hosp, Helsinki, Finland
[3] Blueprint Genet, Quest Diagnost Co, Espoo, Finland
[4] Blueprint Genet, Quest Diagnost Co, Seattle, WA USA
[5] Laval Univ, Quebec Heart & Lung Inst, Quebec City, PQ, Canada
来源
FRONTIERS IN CARDIOVASCULAR MEDICINE | 2023年 / 10卷
关键词
dilated cardiomyopathy; cardiomyopathy; genetic testing; next generation sequencing; diagnostic yield; GENOTYPE-PHENOTYPE CORRELATIONS; 1P36 DELETION SYNDROME; DILATED CARDIOMYOPATHY; MUTATIONS; DETERMINANTS; ASSOCIATION; VARIANTS; FORM;
D O I
10.3389/fcvm.2023.1254272
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
BackgroundFamilial dilated cardiomyopathy (DCM) causes heart failure and may lead to heart transplantation. DCM is typically a monogenic disorder with autosomal dominant inheritance. Currently disease-causing variants have been reported in over 60 genes that encode proteins in sarcomeres, nuclear lamina, desmosomes, cytoskeleton, and mitochondria. Over half of the patients undergoing comprehensive genetic testing are left without a molecular diagnosis even when patient selection follows strict DCM criteria.Methods and resultsThis study was a retrospective review of patients referred for genetic testing at Blueprint Genetics due to suspected inherited DCM. Next generation sequencing panels included 23-316 genes associated with cardiomyopathies and other monogenic cardiac diseases. Variants were considered diagnostic if classified as pathogenic (P) or likely pathogenic (LP). Of the 2,088 patients 514 (24.6%) obtained a molecular diagnosis; 534 LP/P variants were observed across 45 genes, 2.7% (14/514) had two diagnostic variants in dominant genes. Nine copy number variants were identified: two multigene and seven intragenic. Diagnostic variants were observed most often in TTN (45.3%), DSP (6.7%), LMNA (6.7%), and MYH7 (5.2%). Clinical characteristics independently associated with molecular diagnosis were: a lower age at diagnosis, family history of DCM, paroxysmal atrial fibrillation, absence of left bundle branch block, and the presence of an implantable cardioverter-defibrillator.ConclusionsPanel testing provides good diagnostic yield in patients with clinically suspected DCM. Causative variants were identified in 45 genes. In minority, two diagnostic variants were observed in dominant genes. Our results support the use of genetic panels in clinical settings in DCM patients with suspected genetic etiology.
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页数:9
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共 39 条
  • [1] Recommendations for interpreting the loss of function PVS1 ACMG/AMP variant criterion
    Abou Tayoun, Ahmad N.
    Pesaran, Tina
    DiStefano, Marina T.
    Oza, Andrea
    Rehm, Heidi L.
    Biesecker, Leslie G.
    Harrison, Steven M.
    [J]. HUMAN MUTATION, 2018, 39 (11) : 1517 - 1524
  • [2] Genetics and genotype-phenotype correlations in Finnish patients with dilated cardiomyopathy
    Akinrinade, Oyediran
    Ollila, Laura
    Vattulainen, Sanna
    Tallila, Jonna
    Gentile, Massimiliano
    Salmenpera, Pertteli
    Koillinen, Hannele
    Kaartinen, Maija
    Nieminen, Markku S.
    Myllykangas, Samuel
    Alastalo, Tero-Pekka
    Koskenvuo, Juha W.
    Helio, Tiina
    [J]. EUROPEAN HEART JOURNAL, 2015, 36 (34) : 2327 - 2337
  • [3] Fine Mapping of the 1p36 Deletion Syndrome Identifies Mutation of PRDM16 as a Cause of Cardiomyopathy
    Arndt, Anne-Karin
    Schafer, Sebastian
    Drenckhahn, Jorg-Detlef
    Sabeh, M. Khaled
    Plovie, Eva R.
    Caliebe, Almuth
    Klopocki, Eva
    Musso, Gabriel
    Werdich, Andreas A.
    Kalwa, Hermann
    Heinig, Matthias
    Padera, Robert F.
    Wassilew, Katharina
    Bluhm, Julia
    Harnack, Christine
    Martitz, Janine
    Barton, Paul J.
    Greutmann, Matthias
    Berger, Felix
    Hubner, Norbert
    Siebert, Reiner
    Kramer, Hans-Heiner
    Cook, Stuart A.
    MacRae, Calum A.
    Klaassen, Sabine
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2013, 93 (01) : 67 - 77
  • [4] Differences between familial and sporadic dilated cardiomyopathy: ESC EORP Cardiomyopathy & Myocarditis registry
    Asselbergs, Folkert W.
    Sammani, Arjan
    Elliott, Perry
    Gimeno, Juan R.
    Tavazzi, Luigi
    Tendera, Michael
    Kaski, Juan Pablo
    Maggioni, Aldo P.
    Rubis, Pawel P.
    Jurcut, Ruxandra
    Helio, Tiina
    Calo, Leonardo
    Sinagra, Gianfranco
    Zdravkovic, Marija
    Olivotto, Iacopo
    Kavoliuniene, Ausra
    Laroche, Cecile
    Caforio, Alida L. P.
    Charron, Philippe
    [J]. ESC HEART FAILURE, 2021, 8 (01): : 95 - 105
  • [5] PLEKHM2 Loss-of-Function Is Associated With Dilated Cardiomyopathy
    Atkins, Jessica
    Gensemer, Cortney
    Foil, Kimberly
    Morningstar, Jordan
    Ramos, Hannia
    Van Bakel, Adrian B.
    Norris, Russell A.
    Judge, Daniel P.
    [J]. CIRCULATION-GENOMIC AND PRECISION MEDICINE, 2022, 15 (04): : 344 - 346
  • [6] Genomic study of dilated cardiomyopathy in a group of Mexican patients using site-directed next generation sequencing
    Carnevale, Alessandra
    Rosas-Madrigal, Sandra
    Rosendo-Gutierrez, Rigoberto
    Lopez-Mora, Enrique
    Romero-Hidalgo, Sandra
    Avila-Vazzini, Nydia
    Jacobo-Albavera, Leonor
    Dominguez-Perez, Mayra
    Vargas-Alarcon, Gilberto
    Perez-Villatoro, Fernando
    Navarrete-Martinez, Juana Ines
    Villarreal-Molina, Maria Teresa
    [J]. MOLECULAR GENETICS & GENOMIC MEDICINE, 2020, 8 (11):
  • [7] Association of Titin-Truncating Genetic Variants With Life-threatening Cardiac Arrhythmias in Patients With Dilated Cardiomyopathy and Implanted Defibrillators
    Corden, Ben
    Jarman, Julian
    Whiffin, Nicola
    Tayal, Upasana
    Buchan, Rachel
    Sehmi, Joban
    Harper, Andrew
    Midwinter, William
    Lascelles, Karen
    Markides, Vias
    Mason, Mark
    Baksi, John
    Pantazis, Antonis
    Pennell, Dudley J.
    Barton, Paul J.
    Prasad, Sanjay K.
    Wong, Tom
    Cook, Stuart A.
    Ware, James S.
    [J]. JAMA NETWORK OPEN, 2019, 2 (06) : E196520
  • [8] The genetics of dilated cardiomyopathy
    Dellefave, Lisa
    McNally, Elizabeth M.
    [J]. CURRENT OPINION IN CARDIOLOGY, 2010, 25 (03) : 198 - 204
  • [9] Clinical Risk Score to Predict Pathogenic Genotypes in Patients With Dilated Cardiomyopathy
    Escobar-Lopez, Luis
    Ochoa, Juan Pablo
    Royuela, Ana
    Verdonschot, Job A. J.
    Dal Ferro, Matteo
    Espinosa, Maria Angeles
    Sabater-Molina, Maria
    Gallego-Delgado, Maria
    Larranaga-Moreira, Jose M.
    Garcia-Pinilla, Jose M.
    Basurte-Elorz, Maria Teresa
    Rodriguez-Palomares, Jose F.
    Climent, Vicente
    Bermudez-Jimenez, Francisco J.
    Mogollon-Jimenez, Maria Victoria
    Lopez, Javier
    Pena-Pena, Maria Luisa
    Garcia-Alvarez, Ana
    Lopez-Abel, Bernardo
    Ripoll-Vera, Tomas
    Palomino-Doza, Julian
    Bayes-Genis, Antoni
    Brugada, Ramon
    Idiazabal, Uxua
    Mirelis, Jesus G.
    Dominguez, Fernando
    Henkens, Michiel T. H. M.
    Krapels, Ingrid P. C.
    Brunner, Han G.
    Paldino, Alessia
    Zaffalon, Denise
    Mestroni, Luisa
    Sinagra, Gianfranco
    Heymans, Stephane R. B.
    Merlo, Marco
    Garcia-Pavia, Pablo
    [J]. JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY, 2022, 80 (12) : 1115 - 1126
  • [10] Association of Genetic Variants With Outcomes in Patients With Nonischemic Dilated Cardiomyopathy
    Escobar-Lopez, Luis
    Ochoa, Juan Pablo
    Mirelis, Jesus G.
    Espinosa, Maria Angeles
    Navarro, Marina
    Gallego-Delgado, Maria
    Barriales-Villa, Roberto
    Robles-Mezcua, Ainhoa
    Basurte-Elorz, Maria Teresa
    Garcia-Moreno, Laura Gutierrez
    Climent, Vicente
    Jimenez-Jaimez, Juan
    Mogollon-Jimenez, Maria Victoria
    Lopez, Javier
    Pena-Pena, Maria Luisa
    Garcia-Alvarez, Ana
    Brion, Maria
    Ripoll-Vera, Tomas
    Palomino-Doza, Julian
    Tiron, Coloma
    Idiazabal, Uxua
    Brogger, Maria Noel
    Garcia-Hernandez, Soledad
    Restrepo-Cordoba, Maria Alejandra
    Gonzalez-Lopez, Esther
    Mendez, Irene
    Sabater Molina, Maria
    Villacorta, Eduardo
    Larranaga-Moreira, Jose M.
    Abecia, Ana
    Fernandez, Ana Isabel
    Garcia-Pinilla, Jose M.
    Rodriguez-Palomares, Jose F.
    Gimeno-Blanes, Juan Ramon
    Bayes-Genis, Antoni
    Lara-Pezzi, Enrique
    Dominguez, Fernando
    Garcia-Pavia, Pablo
    [J]. JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY, 2021, 78 (17) : 1682 - 1699