Single-cell transcriptome analysis for cancer and biology of the pancreas: A review on recent progress

被引:1
作者
Tamaddon, Mona [1 ]
Azimzadeh, Mostafa [2 ,3 ,4 ]
Gifani, Peyman [5 ,6 ]
Tavangar, Seyed Mohammad [1 ,7 ]
机构
[1] Univ Tehran Med Sci, Endocrinol & Metab Populat Sci Inst, Chron Dis Res Ctr, Tehran, Iran
[2] Shahid Sadoughi Univ Med Sci, Sch Med, Dept Med Biotechnol, Yazd, Iran
[3] Shahid Sadoughi Univ Med Sci, Yazd Reprod Sci Inst, Med Nanotechnol & Tissue Engn Res Ctr, Yazd, Iran
[4] Shahid Sadoughi Univ Med Sci, Yazd Reprod Sci Inst, Stem Cell Biol Res Ctr, Yazd, Iran
[5] AI VIVO Ltd, Bioinnovat Ctr, Cambridge, England
[6] Univ Cambridge, Inst Syst Biol, Genet Dept, Cambridge, England
[7] Univ Tehran Med Sci, Shariati Hosp, Dept Pathol, Tehran, Iran
关键词
single-cell sequencing; transcriptome analysis; pancreas biology; pancreas cancer; genetic heterogeneity; GENE-EXPRESSION; MOUSE;
D O I
10.3389/fgene.2023.1029758
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Single-cell sequencing has become one of the most used techniques across the wide field of biology. It has enabled researchers to investigate the whole transcriptome at the cellular level across tissues, which unlocks numerous potentials for basic and applied studies in future diagnosis and therapy. Here, we review the impact of single-cell RNA sequencing, as the prominent single-cell technique, in pancreatic biology and cancer. We discuss the most recent findings about pancreatic physiology and pathophysiology owing to this technological advancement in the past few years. Using single-cell RNA sequencing, researchers have been able to discover cellular heterogeneity across healthy cell types, as well as cancer tissues of the pancreas. We will discuss the new immunological targets and new molecular mechanisms of progression in the microenvironment of pancreatic cancer studied using single-cell RNA sequencing. The scope is not limited to cancer tissues, and we cover novel developmental, evolutionary, physiological, and heterogenic insights that have also been achieved recently for pancreatic tissues. We cover all biological insights derived from the single-cell RNA sequencing data, discuss the corresponding pros and cons, and finally, conclude how future research can move better by utilizing single-cell analysis for pancreatic biology.
引用
收藏
页数:11
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