Characterization of a Novel Species of Legionella Isolated from a Healthcare Facility: Legionella resiliens sp. nov

被引:1
作者
Cristino, Sandra [1 ,2 ]
Pascale, Maria Rosaria [1 ,3 ]
Marino, Federica [1 ]
Derelitto, Carlo [1 ]
Salaris, Silvano [4 ]
Orsini, Massimiliano [5 ]
Squarzoni, Stefano [6 ,7 ]
Grottola, Antonella [2 ,8 ]
Girolamini, Luna [1 ,2 ]
机构
[1] Univ Bologna, Dept Biol Geol & Environm Sci, Via San Giacomo 12, I-40126 Bologna, Italy
[2] European Soc Clin Microbiol & Infect Dis ESCMID, Study Grp LegionellaInfect ESGLI, CH-4001 Basel, Switzerland
[3] Univ Bologna, Dept Civil Chem Environm & Mat Engn, Viale Risorgimento 2, I-40136 Bologna, Italy
[4] Univ Padua, Dept Cardiac Thorac Vasc Sci & Publ Hlth, Unit Biostat Epidemiol & Publ Hlth, Via Loredan 18, I-35121 Padua, Italy
[5] Ist Zooprofilatt Sperimentale Venezie, Lab Microbial Ecol & Genom Microorganisms, I-35020 Legnaro, Italy
[6] CNR Inst Mol Genet Luigi Luca Cavalli Sforza, Unit Bologna, I-40136 Bologna, Italy
[7] IRCCS Ist Ortoped Rizzoli, I-40136 Bologna, Italy
[8] Modena Univ Hosp, Unit Mol Virol & Microbiol, Reg Reference Lab Clin Diag Legionellosis, I-41124 Modena, Italy
来源
PATHOGENS | 2024年 / 13卷 / 03期
关键词
Legionella resiliens sp. nov; new species; whole genome sequencing (WGS); aquatic environment; polyphasic taxonomy; CLASSIFICATION SCHEME; SEQUENCE-ANALYSIS; IDENTIFICATION; GENE; ALGORITHM; TOOL; DIFFERENTIATION; DATABASE; PIPELINE; DISEASE;
D O I
10.3390/pathogens13030250
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two Legionella-like isolates, 8cVS16(T )and 9fVS26, were isolated from a water distribution system (WDS) in a healthcare facility. Cells were Gram- and Ziehl Neelsen-stain-negative, rod-shaped, motile, and exhibited a blue-white fluorescence under Wood's lamp at 365 nm. The strains grew in a range of 32-37 C-degrees on BCYE with L-cysteine (Cys+), GVPC, and MWY agar medium, with a positive reaction for oxidase, catalase, and gelatinase. The dominant fatty acids were summed features 3 (C-16:1 omega 7c/C-16:1 omega 6c) (27.7%), C(16:0 )iso (17.5%), and C16:0 (16.3%), and Q13 as the major ubiquinone. The mip and rpoB gene sequences showed a similarity of 96.7% and 92.4%, with L. anisa (ATCC 35292T). The whole genomes sequencing (WGS) performed displayed a GC content of 38.21 mol% for both. The digital DNA-DNA hybridization (dDDH) analysis demonstrated the separation of the two strains from the phylogenetically most related L. anisa (ATCC 35292T), with <= 43% DNA-DNA relatedness. The Average Nucleotide Identity (ANI) between the two strains and L. anisa (ATCC 35292(T)) was 90.74%, confirming that the two isolates represent a novel species of the genus Legionella. The name proposed for this species is Legionella resiliens sp. nov., with 8cVS16T (=DSM 114356T = CCUG 76627T) as the type strain.
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共 83 条
  • [1] CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database
    Alcock, Brian P.
    Raphenya, Amogelang R.
    Lau, Tammy T. Y.
    Tsang, Kara K.
    Bouchard, Megane
    Edalatmand, Arman
    Huynh, William
    Nguyen, Anna-Lisa, V
    Cheng, Annie A.
    Liu, Sihan
    Min, Sally Y.
    Miroshnichenko, Anatoly
    Tran, Hiu-Ki
    Werfalli, Rafik E.
    Nasir, Jalees A.
    Oloni, Martins
    Speicher, David J.
    Florescu, Alexandra
    Singh, Bhavya
    Faltyn, Mateusz
    Hernandez-Koutoucheva, Anastasia
    Sharma, Arjun N.
    Bordeleau, Emily
    Pawlowski, Andrew C.
    Zubyk, Haley L.
    Dooley, Damion
    Griffiths, Emma
    Maguire, Finlay
    Winsor, Geoff L.
    Beiko, Robert G.
    Brinkman, Fiona S. L.
    Hsiao, William W. L.
    Domselaar, Gary, V
    McArthur, Andrew G.
    [J]. NUCLEIC ACIDS RESEARCH, 2020, 48 (D1) : D517 - D525
  • [2] BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
    Alikhan, Nabil-Fareed
    Petty, Nicola K.
    Ben Zakour, Nouri L.
    Beatson, Scott A.
    [J]. BMC GENOMICS, 2011, 12
  • [3] Legioliulin, a new isocoumarin compound responsible for blue-white autofluorescence in Legionella (Fluoribacter) dumoffii under long-wavelength UV light
    Amemura-Maekawa, J
    Hayakawa, Y
    Sugie, H
    Moribayashi, A
    Kura, F
    Chang, B
    Wada, A
    Watanabe, H
    [J]. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 323 (03) : 954 - 959
  • [4] [Anonymous], 1994, Med. Microbiol, DOI DOI 10.1097/00013542-199404000-00001
  • [5] The Flagellar Regulon of Legionella-A Review
    Appelt, Sandra
    Heuner, Klaus
    [J]. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2017, 7
  • [6] The RAST server: Rapid annotations using subsystems technology
    Aziz, Ramy K.
    Bartels, Daniela
    Best, Aaron A.
    DeJongh, Matthew
    Disz, Terrence
    Edwards, Robert A.
    Formsma, Kevin
    Gerdes, Svetlana
    Glass, Elizabeth M.
    Kubal, Michael
    Meyer, Folker
    Olsen, Gary J.
    Olson, Robert
    Osterman, Andrei L.
    Overbeek, Ross A.
    McNeil, Leslie K.
    Paarmann, Daniel
    Paczian, Tobias
    Parrello, Bruce
    Pusch, Gordon D.
    Reich, Claudia
    Stevens, Rick
    Vassieva, Olga
    Vonstein, Veronika
    Wilke, Andreas
    Zagnitko, Olga
    [J]. BMC GENOMICS, 2008, 9 (1)
  • [7] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
    Bankevich, Anton
    Nurk, Sergey
    Antipov, Dmitry
    Gurevich, Alexey A.
    Dvorkin, Mikhail
    Kulikov, Alexander S.
    Lesin, Valery M.
    Nikolenko, Sergey I.
    Son Pham
    Prjibelski, Andrey D.
    Pyshkin, Alexey V.
    Sirotkin, Alexander V.
    Vyahhi, Nikolay
    Tesler, Glenn
    Alekseyev, Max A.
    Pevzner, Pavel A.
    [J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) : 455 - 477
  • [8] Phylogenetic diversity of intra-amoebal legionellae as revealed by 16S rRNA gene sequence comparison
    Birtles, RJ
    Rowbotham, TJ
    Raoult, D
    Harrison, TG
    [J]. MICROBIOLOGY-UK, 1996, 142 : 3525 - 3530
  • [9] 10 NEW SPECIES OF LEGIONELLA
    BRENNER, DJ
    STEIGERWALT, AG
    GORMAN, GW
    WILKINSON, HW
    BIBB, WF
    HACKEL, M
    TYNDALL, RL
    CAMPBELL, J
    FEELEY, JC
    THACKER, WL
    SKALIY, P
    MARTIN, WT
    BRAKE, BJ
    FIELDS, BS
    MCEACHERN, HV
    CORCORAN, LK
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1985, 35 (01): : 50 - 59
  • [10] LEGIONELLA-BOZEMANII SP-NOV AND LEGIONELLA-DUMOFFI SP-NOV - CLASSIFICATION OF 2 ADDITIONAL SPECIES OF LEGIONELLA ASSOCIATED WITH HUMAN PNEUMONIA
    BRENNER, DJ
    STEIGERWALT, AG
    GORMAN, GW
    WEAVER, RE
    FEELEY, JC
    CORDES, LG
    WILKINSON, HW
    PATTON, C
    THOMASON, BM
    LEWALLENSASSEVILLE, KR
    [J]. CURRENT MICROBIOLOGY, 1980, 4 (02) : 111 - 116