Current perspectives of lncRNAs in abiotic and biotic stress tolerance in plants

被引:7
作者
Jin, Xin [1 ,2 ]
Wang, Zemin [1 ,2 ]
Li, Xuan [2 ]
Ai, Qianyi [2 ]
Wong, Darren Chern Jan [3 ]
Zhang, Feiyan [2 ]
Yang, Jiangwei [1 ,2 ]
Zhang, Ning [1 ,2 ]
Si, Huaijun [1 ,2 ]
机构
[1] Gansu Agr Univ, State Key Lab Aridland Crop Sci, Lanzhou, Peoples R China
[2] Gansu Agr Univ, Coll Life Sci & Technol, Lanzhou, Peoples R China
[3] Australian Natl Univ, Res Sch Biol, Div Ecol & Evolut, Acton, ACT, Australia
来源
FRONTIERS IN PLANT SCIENCE | 2024年 / 14卷
基金
中国国家自然科学基金;
关键词
long noncoding RNA; small RNA; competing endogenous RNAs; epigenetic; abiotic stress; biotic stress; LONG NONCODING RNAS; ARABIDOPSIS-THALIANA; DROUGHT; EXPRESSION; HEAT; COLD; METHYLATION; RESPONSES; PROTEIN; ROLES;
D O I
10.3389/fpls.2023.1334620
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Abiotic/biotic stresses pose a major threat to agriculture and food security by impacting plant growth, productivity and quality. The discovery of extensive transcription of large RNA transcripts that do not code for proteins, termed long non-coding RNAs (lncRNAs) with sizes larger than 200 nucleotides in length, provides an important new perspective on the centrality of RNA in gene regulation. In plants, lncRNAs are widespread and fulfill multiple biological functions in stress response. In this paper, the research advances on the biological function of lncRNA in plant stress response were summarized, like as Natural Antisense Transcripts (NATs), Competing Endogenous RNAs (ceRNAs) and Chromatin Modification etc. And in plants, lncRNAs act as a key regulatory hub of several phytohormone pathways, integrating abscisic acid (ABA), jasmonate (JA), salicylic acid (SA) and redox signaling in response to many abiotic/biotic stresses. Moreover, conserved sequence motifs and structural motifs enriched within stress-responsive lncRNAs may also be responsible for the stress-responsive functions of lncRNAs, it will provide a new focus and strategy for lncRNA research. Taken together, we highlight the unique role of lncRNAs in integrating plant response to adverse environmental conditions with different aspects of plant growth and development. We envisage that an improved understanding of the mechanisms by which lncRNAs regulate plant stress response may further promote the development of unconventional approaches for breeding stress-resistant crops.
引用
收藏
页数:11
相关论文
共 73 条
  • [1] Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses
    Ben Amor, Besma
    Wirth, Sonia
    Merchan, Francisco
    Laporte, Philippe
    d'Aubenton-Carafa, Yves
    Hirsch, Judith
    Maizel, Alexis
    Mallory, Allison
    Lucas, Antoine
    Deragon, Jean Marc
    Vaucheret, Herve
    Thermes, Claude
    Crespi, Martin
    [J]. GENOME RESEARCH, 2009, 19 (01) : 57 - 69
  • [2] Genome-wide investigation of regulatory roles of lncRNAs in response to heat and drought stress in Brassica juncea (Indian mustard)
    Bhatia, Garima
    Singh, Aman
    Verma, Deepika
    Sharma, Shailesh
    Singh, Kashmir
    [J]. ENVIRONMENTAL AND EXPERIMENTAL BOTANY, 2020, 171
  • [3] Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs
    Calixto, Cristiane P. G.
    Tzioutziou, Nikoleta A.
    James, Allan B.
    Hornyik, Csaba
    Guo, Wenbin
    Zhang, Runxuan
    Nimmo, Hugh G.
    Brown, John W. S.
    [J]. FRONTIERS IN PLANT SCIENCE, 2019, 10
  • [4] Genome-wide identification and association analysis for virus-responsive lncRNAs in rice (Oryza sativa L.)
    Cao, Weilin
    Cao, Junyuan
    Gao, Jiaqi
    Wang, Ruolin
    Li, Ying
    Li, Changyuan
    Gan, Liming
    Zhu, Changxiang
    [J]. PLANT GROWTH REGULATION, 2022, 98 (01) : 65 - 76
  • [5] Evolution of heat-shock protein expression underlying adaptive responses to environmental stress
    Chen, Bing
    Feder, Martin E.
    Kang, Le
    [J]. MOLECULAR ECOLOGY, 2018, 27 (15) : 3040 - 3054
  • [6] PlantNATsDB: a comprehensive database of plant natural antisense transcripts
    Chen, Dijun
    Yuan, Chunhui
    Zhang, Jian
    Zhang, Zhao
    Bai, Lin
    Meng, Yijun
    Chen, Ling-Ling
    Chen, Ming
    [J]. NUCLEIC ACIDS RESEARCH, 2012, 40 (D1) : D1187 - D1193
  • [7] LncRNA TCONS_00021861 is functionally associated with drought tolerance in rice (Oryza sativa L.) via competing endogenous RNA regulation
    Chen, Jiajia
    Zhong, Yuqing
    Qi, Xin
    [J]. BMC PLANT BIOLOGY, 2021, 21 (01)
  • [8] Isolation and characterization of cDNA clones expressed under male sex expression conditions in a monoecious cucumber plant (Cucumis sativus L. cv. Winter Long)
    Cho, JK
    Koo, DH
    Nam, YW
    Han, CT
    Lim, HT
    Bang, JW
    Hur, Y
    [J]. EUPHYTICA, 2005, 146 (03) : 271 - 281
  • [9] Antisense COOLAIR mediates the coordinated switching of chromatin states at FLC during vernalization
    Csorba, Tibor
    Questa, Julia I.
    Sun, Qianwen
    Dean, Caroline
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (45) : 16160 - 16165
  • [10] Genome-Wide Identification of lncRNAs and Analysis of ceRNA Networks During Tomato Resistance to Phytophthora infestans
    Cui, Jun
    Jiang, Ning
    Hou, Xinxin
    Wu, Sihan
    Zhang, Qiang
    Meng, Jun
    Luan, Yushi
    [J]. PHYTOPATHOLOGY, 2020, 110 (02) : 456 - 464