Biophysical and structural characterization of tetramethrin serum protein complex and its toxicological implications

被引:5
作者
Singh, Pratik [1 ]
Gopi, Priyanka [1 ]
Rani, Majji Sai Sudha [1 ]
Singh, Shweta [1 ]
Pandya, Prateek [1 ]
机构
[1] Amity Univ, Amity Inst Forens Sci, Noida 201303, Uttar Pradesh, India
关键词
binding; circular dichorism spectroscopy; conformational analysis; fluorescence spectroscopy; human serum albumin; molecular simulations; quantum mechanical calculations; tetramethrin; thermodynamics; toxicity prediction; MOLECULAR-DYNAMICS; ALBUMIN; BINDING;
D O I
10.1002/jmr.3076
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Tetramethrin (TMT) is a commonly used insecticide and has a carcinogenic and neurodegenerative effect on humans. The binding mechanism and toxicological implications of TMT to human serum albumin (HSA) were examined in this study employing a combination of biophysical and computational methods indicating moderate binding affinity and potential hepato and renal toxicity. Fluorescence quenching experiments showed that TMT binds to HSA with a moderate affinity, and the binding process was spontaneous and predominantly enthalpy-driven. Circular dichroism spectroscopy revealed that TMT binding did not induce any significant conformational changes in HSA, resulting in no changes in its alpha-helix content. The binding site and modalities of TMT interactions with HSA as computed by molecular docking and molecular dynamics simulations revealed that it binds to Sudlow site II of HSA via hydrophobic interactions through its dimethylcyclopropane carboxylate methyl propanyl group. The structural dynamics of TMT induce proper fit into the binding site creating increased and stabilizing interactions. Additionally, molecular mechanics-Poisson Boltzmann surface area calculations also indicated that non-polar and van der Waals were found to be the major contributors to the high binding free energy of the complex. Quantum mechanics (QM) revealed the conformational energies of the binding confirmation and the degree of deviation from the global minimum energy conformation of TMT. The results of this study provide a comprehensive understanding of the binding mechanism of TMT with HSA, which is important for evaluating the toxicity of this insecticide in humans.
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页数:15
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共 68 条
[1]   Understanding the fate of human serum albumin upon interaction with edifenphos: Biophysical and biochemical approaches [J].
Ahmad, Ajaz ;
Ahmad, Masood .
PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY, 2018, 145 :46-55
[2]   Studies on conformational changes induced by binding of pendimethalin with human serum albumin [J].
Ahmad, Md Irshad ;
Potshangbam, Angamba Meetei ;
Javed, Mehjbeen ;
Ahmad, Masood .
CHEMOSPHERE, 2020, 243
[3]   Amygdalin as multi-target anticancer drug against targets of cell division cycle: double docking and molecular dynamics simulation [J].
Al-Khafaji, Khattab ;
Tok, Tugba Taskin .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2021, 39 (06) :1965-1974
[4]   The Relationship between Hydrophobicity and Drug-Protein Binding in Human Serum Albumin: A Quartz Crystal Microbalance Study [J].
Alhankawi, Ahmad R. ;
Al-Husseini, Jacob K. ;
Spindler, Archie ;
Baker, Clark ;
Shoniwa, Tonderai T. ;
Ahmed, Mohammed ;
Chiarelli, Peter A. ;
Johal, Malkiat S. .
BIOPHYSICA, 2022, 2 (02) :113-120
[5]   Investigation by Fluorescence Spectroscopy, Resonance Rayleigh Scattering and Zeta Potential Approaches of the Separate and Simultaneous Binding Effect of Paclitaxel and Estradiol with Human Serum Albumin [J].
Amani, Narjes ;
Saberi, Mohammad Reza ;
Chamani, Jamshid Khan .
PROTEIN AND PEPTIDE LETTERS, 2011, 18 (09) :935-951
[6]   Spectroscopic and computational approaches to investigate the binding mechanism of multi-purpose dye pararosaniline with serum albumin protein [J].
Arsha, P. ;
Gopi, Priyanka ;
Rani, Majji Sai Sudha ;
Shankar, Manwi ;
Pandya, Prateek .
JOURNAL OF MOLECULAR LIQUIDS, 2024, 394
[7]   The Universal Soldier: Enzymatic and Non-Enzymatic Antioxidant Functions of Serum Albumin [J].
Belinskaia, Daria A. ;
Voronina, Polina A. ;
Shmurak, Vladimir I. ;
Vovk, Mikhail A. ;
Batalova, Anastasia A. ;
Jenkins, Richard O. ;
Goncharov, Nikolay V. .
ANTIOXIDANTS, 2020, 9 (10) :1-29
[8]   Synthetic carboline compounds targeting protein: biophysical and biological perspective [J].
Bhattacharjee, Paromita ;
Sarkar, Sarita ;
Shmatova, Olga I. ;
Nenajdenko, Valentine G. ;
Pandya, Prateek ;
Bhadra, Kakali .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2021, 39 (10) :3703-3720
[9]   Targeting different RNA motifs by beta carboline alkaloid, harmalol: a comparative photophysical, calorimetric, and molecular docking approach [J].
Bhattacharjee, Paromita ;
Sarkar, Sarita ;
Pandya, Prateek ;
Bhadra, Kakali .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2016, 34 (12) :2722-2740
[10]   Structural and Dynamical Differences in the Spike Protein RBD in the SARS-CoV-2 Variants B.1.1.7 and B.1.351 [J].
Bhattarai, Nisha ;
Baral, Prabin ;
Gerstman, Bernard S. ;
Chapagain, Prem P. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2021, 125 (26) :7101-7107