Unraveling the role of disulfidptosis-related LncRNAs in colon cancer: a prognostic indicator for immunotherapy response, chemotherapy sensitivity, and insights into cell death mechanisms

被引:32
作者
Chi, Hao [1 ]
Huang, Jinbang [1 ]
Yan, Yang [2 ]
Jiang, Chenglu [1 ]
Zhang, Shengke [1 ]
Chen, Haiqing [1 ]
Jiang, Lai [1 ]
Zhang, Jieying [3 ]
Zhang, Qinghong [4 ]
Yang, Guanhu [5 ]
Tian, Gang [6 ]
机构
[1] Southwest Med Univ, Clin Med Coll, Luzhou, Peoples R China
[2] Guizhou Med Univ, Affiliated Hosp 3, Dept Oncol, Duyun, Peoples R China
[3] Tianjin Univ Tradit Chinese Med, Teaching Hosp 1, Tianjin, Peoples R China
[4] Heilongjiang Univ Chinese Med, Harbin, Heilongjiang, Peoples R China
[5] Ohio Univ, Dept Specialty Med, Athens, OH 45701 USA
[6] Southwest Med Univ, Affiliated Hosp, Dept Lab Med, Luzhou, Peoples R China
关键词
Disulfidptosis; Colon cancer; LnRNAs; Tumor microenvironment; Prognostic markers; Immunotherapy response; Chemotherapy sensitivity; LONG NONCODING RNA; CLINICAL-OUTCOMES; PROLIFERATION; ACTIVATION; SURVIVAL; ZEB1-AS1; PREDICT;
D O I
10.3389/fmolb.2023.1254232
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background: Colon cancer, a prevalent and deadly malignancy worldwide, ranks as the third leading cause of cancer-related mortality. Disulfidptosis stress triggers a unique form of programmed cell death known as disulfidoptosis, characterized by excessive intracellular cystine accumulation. This study aimed to establish reliable bioindicators based on long non-coding RNAs (LncRNAs) associated with disulfidptosis-induced cell death, providing novel insights into immunotherapeutic response and prognostic assessment in patients with colon adenocarcinoma (COAD).Methods: Univariate Cox proportional hazard analysis and Lasso regression analysis were performed to identify differentially expressed genes strongly associated with prognosis. Subsequently, a multifactorial model for prognostic risk assessment was developed using multiple Cox proportional hazard regression. Furthermore, we conducted comprehensive evaluations of the characteristics of disulfidptosis response-related LncRNAs, considering clinicopathological features, tumor microenvironment, and chemotherapy sensitivity. The expression levels of prognosis-related genes in COAD patients were validated using quantitative real-time fluorescence PCR (qRT-PCR). Additionally, the role of ZEB1-SA1 in colon cancer was investigated through CCK8 assays, wound healing experiment and transwell experiments.Results: disulfidptosis response-related LncRNAs were identified as robust predictors of COAD prognosis. Multifactorial analysis revealed that the risk score derived from these LncRNAs served as an independent prognostic factor for COAD. Patients in the low-risk group exhibited superior overall survival (OS) compared to those in the high-risk group. Accordingly, our developed Nomogram prediction model, integrating clinical characteristics and risk scores, demonstrated excellent prognostic efficacy. In vitro experiments demonstrated that ZEB1-SA1 promoted the proliferation and migration of COAD cells.Conclusion: Leveraging medical big data and artificial intelligence, we constructed a prediction model for disulfidptosis response-related LncRNAs based on the TCGA-COAD cohort, enabling accurate prognostic prediction in colon cancer patients. The implementation of this model in clinical practice can facilitate precise classification of COAD patients, identification of specific subgroups more likely to respond favorably to immunotherapy and chemotherapy, and inform the development of personalized treatment strategies for COAD patients based on scientific evidence.
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页数:21
相关论文
共 75 条
[1]  
Al-Kuraya Khawla S, 2009, Saudi J Gastroenterol, V15, P217, DOI 10.4103/1319-3767.56087
[2]   xCell: digitally portraying the tissue cellular heterogeneity landscape [J].
Aran, Dvir ;
Hu, Zicheng ;
Butte, Atul J. .
GENOME BIOLOGY, 2017, 18
[3]   The Landscape of Tumor-Specific Antigens in Colorectal Cancer [J].
Bakarurraini, Nurul Ainaa Adilah Rus ;
Ab Mutalib, Nurul Syakima ;
Jamal, Rahman ;
Abu, Nadiah .
VACCINES, 2020, 8 (03) :1-17
[4]  
Brunson Jason Cory, 2020, Journal of open source software, V5, DOI 10.21105/joss.02017
[5]   Oral cancer: changing the aim of the biopsy in the age of precision medicine. A review [J].
Bruschini, Roberto ;
Maffini, Fausto ;
Chiesa, Fausto ;
Lepanto, Daniela ;
De Berardinis, Rita ;
Chu, Francesco ;
Tagliabue, Marta ;
Giugliano, Gioacchino ;
Ansarin, Mohssen .
ACTA OTORHINOLARYNGOLOGICA ITALICA, 2021, 41 (02) :108-119
[6]   Development and validation of a novel endoplasmic reticulum stress-related lncRNA prognostic signature and candidate drugs in breast cancer [J].
Cai, Jiehui ;
Ji, Zeqi ;
Wu, Jinyao ;
Chen, Lingzhi ;
Zheng, Daitian ;
Chen, Yaokun ;
Zhang, Xinkang ;
Xie, Wanchun ;
Huang, Jieying ;
Chen, Manqi ;
Lin, Ru ;
Lin, Weixun ;
Chen, Yexi ;
Li, Zhiyang .
FRONTIERS IN GENETICS, 2022, 13
[7]   Novel lncRNA LINC00941 Promotes Proliferation and Invasion of Colon Cancer Through Activation of MYC [J].
Chang, Lin ;
Zhou, Dongmin ;
Luo, Suxia .
ONCOTARGETS AND THERAPY, 2021, 14 :1173-1186
[8]  
Chen BB, 2018, METHODS MOL BIOL, V1711, P243, DOI 10.1007/978-1-4939-7493-1_12
[9]   Unbalanced Glutamine Partitioning between CD8T Cells and Cancer Cells Accompanied by Immune Cell Dysfunction in Hepatocellular Carcinoma [J].
Chen, Jianfei ;
Wang, Rui ;
Liu, Zhongliang ;
Fan, Jun ;
Liu, Shenglu ;
Tan, Shunde ;
Li, Xinkai ;
Li, Bo ;
Yang, Xiaoli .
CELLS, 2022, 11 (23)
[10]  
Chetroiu Diana, 2021, J Med Life, V14, P462, DOI 10.25122/jml-2021-0192