Characteristic of molecular subtypes based on PANoptosis-related genes and experimental verification of hepatocellular carcinoma

被引:0
作者
Ren, Haitao [1 ]
Kang, Na [2 ]
Yin, Shuan [3 ]
Xu, Chen [4 ]
Qu, Tengfei [5 ]
Dai, Dongdong [5 ]
机构
[1] Qingdao Univ, Dept Intervent Med, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
[2] Qingdao Univ, Affiliated Hosp, Operating Room, Qingdao 266071, Shangdong, Peoples R China
[3] Qingdao Univ, Dept Pediat, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
[4] Qingdao Univ, Dept Infect Dis, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
[5] Qingdao Univ, Dept Hepatobiliary & Pancreat Surg, Affiliated Hosp, Qingdao 266071, Shangdong, Peoples R China
来源
AGING-US | 2023年 / 15卷 / 10期
基金
中国国家自然科学基金;
关键词
hepatocellular carcinoma; PANoptosis-related genes; risk model; immune infiltration; molecular subtypes; EOSINOPHILS; SURVIVAL;
D O I
暂无
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Hepatocellular carcinoma (HCC) is a type of liver cancer that originates from liver cells. It is one of the most common types of liver cancer and a leading cause of cancer-related death worldwide. Early detection and treatment can improve the HCC prognosis. Therefore, it is necessary to further improve HCC markers and risk stratification. PANoptosome is a cytoplasmic polymer protein complex that regulates a proinflammatory programmed cell death pathway called "PANoptosis". The role of PANoptosis in HCC remains unclear. In this study, the molecular changes of PANoptosis related genes (PAN-RGs) in HCC were systematically evaluated. We characterized the heterogeneity of HCC by using consensus clustering to identify two distinct subtypes. The two subtypes showed different survival rate, biological function, chemotherapy drug sensitivity and immune microenvironment. After identification of PAN-RG differential expression genes (DEGs), a prognostic model was established by Cox regression analysis using minimum absolute contraction and selection operator (LASSO), and its prognostic value was verified by Cox regression analysis, Kaplan-Meier curve and receiver operating characteristic (ROC) curve. Our own specimens were also used to further validate the prognostic significance and possible clinical value of the selected targets. Subsequently, we conducted a preliminary discussion on the reasons for the influence of the model on the prognosis through TME analysis, drug resistance analysis, TMB analysis and other studies. This study provides a new idea for individualized and precise treatment of HCC.
引用
收藏
页码:4159 / 4181
页数:23
相关论文
共 63 条
  • [51] Evolving therapeutic landscape of advanced hepatocellular carcinoma
    Yang, Chen
    Zhang, Hailin
    Zhang, Linmeng
    Zhu, Andrew X.
    Bernards, Rene
    Qin, Wenxin
    Wang, Cun
    [J]. NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY, 2023, 20 (04) : 203 - 222
  • [52] Role of epigenetic modification in interferon treatment of hepatitis B virus infection
    Yang, Zhijing
    Sun, Baozhen
    Xiang, Jingcheng
    Wu, Han
    Kan, Shaoning
    Hao, Ming
    Chang, Lu
    Liu, Huimin
    Wang, Dongxu
    Liu, Weiwei
    [J]. FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [53] Angiogenesis in hepatocellular carcinoma: mechanisms and anti-angiogenic therapies
    Yao, Changyu
    Wu, Shilun
    Kong, Jian
    Sun, Yiwen
    Bai, Yannan
    Zhu, Ruhang
    Li, Zhuxin
    Sun, Wenbing
    Zheng, Lemin
    [J]. CANCER BIOLOGY & MEDICINE, 2023, 20 (01) : 25 - 43
  • [54] Multipotent mesenchymal stromal cells play critical roles in hepatocellular carcinoma initiation, progression and therapy
    Yin, Zeli
    Jiang, Keqiu
    Li, Rui
    Dong, Chengyong
    Wang, Liming
    [J]. MOLECULAR CANCER, 2018, 17
  • [55] Identification of TGF-β signaling-related molecular patterns, construction of a prognostic model, and prediction of immunotherapy response in gastric cancer
    Zeng, Cheng
    He, Rong
    Dai, Yuyang
    Lu, Xiaohuan
    Deng, Linghui
    Zhu, Qi
    Liu, Yu
    Liu, Qian
    Lu, Wenbin
    Wang, Yue
    Jin, Jianhua
    [J]. FRONTIERS IN PHARMACOLOGY, 2022, 13
  • [56] Elevated neutrophil extracellular traps by HBV-mediated S100A9-TLR4/RAGE-ROS cascade facilitate the growth and metastasis of hepatocellular carcinoma
    Zhan, Xi
    Wu, Rui
    Kong, Xue-Hua
    You, Yan
    He, Kun
    Sun, Xiao-Yu
    Huang, Yong
    Chen, Wei-Xian
    Duan, Liang
    [J]. CANCER COMMUNICATIONS, 2023, 43 (02) : 225 - 245
  • [57] Caspase polymorphisms and prognosis of hepatocellular carcinoma
    Zhang, Song
    Xiao, Qianyi
    Shi, Zhuqing
    Yu, Guopeng
    Ma, Xiao-Pin
    Chen, Haitao
    Zhang, Pengyin
    Shen, Suqin
    Sai-Yin, He-Xi Ge
    Chen, Tao-Yang
    Lu, Pei-Xin
    Wang, Neng-Jin
    Ren, Weihua
    Huang, Peng
    Xie, Jun
    Conran, Carly
    Zheng, S. Lilly
    Yu, Long
    Xu, Jianfeng
    Jiang, De-Ke
    [J]. PLOS ONE, 2017, 12 (04):
  • [58] The regulation of the ZBP1-NLRP3 inflammasome and its implications in pyroptosis, apoptosis, and necroptosis (PANoptosis)
    Zheng, Min
    Kanneganti, Thirumala-Devi
    [J]. IMMUNOLOGICAL REVIEWS, 2020, 297 (01) : 26 - 38
  • [59] Zheng P, 2023, PATHOL RES PRACT, V245, DOI [10.1016/1.prp.2023.154454, DOI 10.1016/1.PRP.2023.154454]
  • [60] Identification of a Pyroptosis-Related Gene Signature for Predicting Overall Survival and Response to Immunotherapy in Hepatocellular Carcinoma
    Zheng, Susu
    Xie, Xiaoying
    Guo, Xinkun
    Wu, Yanfang
    Chen, Guobin
    Chen, Xiaochun
    Wang, Meixia
    Xue, Tongchun
    Zhang, Boheng
    [J]. FRONTIERS IN GENETICS, 2021, 12