Vibrational spectroscopy and its future applications in microbiology

被引:7
作者
Jansson, Miia Marika [1 ]
Kogler, Martin [2 ]
Horkko, Sohvi [3 ]
Ala-Kokko, Tero [4 ,5 ]
Rieppo, Lassi [1 ]
机构
[1] Univ Oulu, Res Unit Med Imaging Phys & Technol, Oulu, Finland
[2] VTT Tech Res Ctr Finland, Sensing Solut, Oulu, Finland
[3] Univ Oulu, Res Unit Biomed Med Microbiol & Immunol, Fac Med, Oulu, Finland
[4] Oulu Univ Hosp, Dept Anesthesiol, Div Intens Care, Oulu, Finland
[5] Med Res Ctr Oulu, Res Grp Surg Anesthesiol & Intens Care, Oulu, Finland
关键词
Fourier transform infrared spectroscopy; microbiology; Raman spectroscopy; time-gated Raman spectroscopy; surface-enhanced Raman spectroscopy; RAMAN-SPECTROSCOPY; ANTIMICROBIAL RESISTANCE; SERS PLATFORM; REAL-TIME; FT-IR; IDENTIFICATION; INFECTION; SUSCEPTIBILITY; DIAGNOSIS; DIFFERENTIATION;
D O I
10.1080/05704928.2021.1942894
中图分类号
TH7 [仪器、仪表];
学科分类号
0804 ; 080401 ; 081102 ;
摘要
Vibrational spectroscopic techniques, namely Fourier transform infrared (FTIR) and Raman spectroscopy, are based on the study of molecular vibrations, and they are complementary techniques to each other. This review provides an overview of the vibrational spectroscopic techniques applied in microbiology during the past decade. In addition, future applications of the elaborated spectroscopic techniques will be highlighted. The results of this review show that both FTIR and Raman spectroscopy are promising alternatives to conventional diagnostic approaches because they provide label-free and noninvasive bacterial detection, identification, and antibiotic susceptibility testing in a single step. Cost-effective, accurate, and rapid tests are needed in order to improve diagnostics and patient care, to decrease the use of unnecessary antimicrobial agents, to prevent resistant microbials, and to decrease the overall burden of outbreaks. Prior to that, however, the presented approaches need to be validated in a clinical workflow against the conventional diagnostic approaches.
引用
收藏
页码:132 / 158
页数:27
相关论文
共 84 条
  • [1] Exhaled Volatile Organic Compounds of Infection: A Systematic Review
    Ahmed, Waqar M.
    Lawal, Oluwasola
    Nilsen, Tamara M.
    Goodacre, Royston
    Fowler, Stephen J.
    [J]. ACS INFECTIOUS DISEASES, 2017, 3 (10): : 695 - 710
  • [2] Multiple metabolomics of uropathogenic E-coli reveal different information content in terms of metabolic potential compared to virulence factors
    AlRabiah, Haitham
    Xu, Yun
    Rattray, Nicholas J. W.
    Vaughan, Andrew A.
    Gibreel, Tarek
    Sayqal, Ali
    Upton, Mathew
    Allwood, William
    Goodacre, Royston
    [J]. ANALYST, 2014, 139 (17) : 4193 - 4199
  • [3] Detection and Differentiation of Bacterial and Fungal Infection of Neutrophils from Peripheral Blood Using Raman Spectroscopy
    Arend, Natalie
    Pittner, Angelina
    Ramoji, Anuradha
    Mondol, Abdullah S.
    Dahms, Marcel
    Rueger, Jan
    Kurzai, Oliver
    Schie, Iwan W.
    Bauer, Michael
    Popp, Juergen
    Neugebauer, Ute
    [J]. ANALYTICAL CHEMISTRY, 2020, 92 (15) : 10560 - 10568
  • [4] Discrimination of urinary tract infection pathogens by means of their growth profiles using surface enhanced Raman scattering
    Avci, Ertug
    Kaya, Nur Selin
    Ucankus, Gizem
    Culha, Mustafa
    [J]. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2015, 407 (27) : 8233 - 8241
  • [5] Raman microspectroscopy differentiates perinatal pathogens on ex vivo infected human fetal membrane tissues
    Ayala, Oscar D.
    Doster, Ryan S.
    Manning, Shannon D.
    O'Brien, Christine M.
    Aronoff, David M.
    Gaddy, Jennifer A.
    Mahadevan-Jansen, Anita
    [J]. JOURNAL OF BIOPHOTONICS, 2019, 12 (09)
  • [6] Heteroresistant Bacteria Detected by an Extended Raman-Based Antibiotic Susceptibility Test
    Bauer, D.
    Wieland, K.
    Qiu, L.
    Neumann-Cip, A-C
    Magistro, G.
    Stief, C.
    Wieser, A.
    Haisch, C.
    [J]. ANALYTICAL CHEMISTRY, 2020, 92 (13) : 8722 - 8731
  • [7] Towards enhanced optical sensor performance: SEIRA and SERS with plasmonic nanostars
    Bibikova, O.
    Haas, J.
    Lopez-Lorente, A. I.
    Popov, A.
    Kinnunen, M.
    Meglinski, I.
    Mizaikoff, B.
    [J]. ANALYST, 2017, 142 (06) : 951 - 958
  • [8] Best Practices for Detection of Bloodstream Infection
    Burnham, Carey-Ann D.
    Yarbrough, Melanie L.
    [J]. JOURNAL OF APPLIED LABORATORY MEDICINE, 2019, 3 (04) : 740 - 742
  • [9] COVID-19 salivary Raman fingerprint: innovative approach for the detection of current and past SARS-CoV-2 infections
    Carlomagno, C.
    Bertazioli, D.
    Gualerzi, A.
    Picciolini, S.
    Banfi, P. I.
    Lax, A.
    Messina, E.
    Navarro, J.
    Bianchi, L.
    Caronni, A.
    Marenco, F.
    Monteleone, S.
    Arienti, C.
    Bedoni, M.
    [J]. SCIENTIFIC REPORTS, 2021, 11 (01)
  • [10] Centers for Disease Control and Prevention, BURD FUNG DIS US