Semi-Supervised Unpaired Medical Image Segmentation Through Task-Affinity Consistency

被引:35
作者
Chen, Jingkun [1 ,2 ]
Zhang, Jianguo [1 ,3 ,4 ]
Debattista, Kurt [2 ]
Han, Jungong [2 ,5 ]
机构
[1] Southern Univ Sci & Technol, Dept Comp Sci & Engn, Shenzhen 518055, Peoples R China
[2] Univ Warwick, Warwick Mfg Grp, Coventry CV4 7AL, England
[3] Southern Univ Sci & Technol, Res Inst Trustworthy Autonomous Syst, Shenzhen 518055, Peoples R China
[4] Peng Cheng Lab, Shenzhen 518066, Peoples R China
[5] Aberystwyth Univ, Dept Comp Sci, Aberystwyth SY23 3FL, Wales
关键词
Image segmentation; Task analysis; Feature extraction; Training; Semisupervised learning; Medical diagnostic imaging; Knowledge transfer; Semi-supervised; segmentation; contextual; structural; task-affinity; consistency;
D O I
10.1109/TMI.2022.3213372
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Deep learning-based semi-supervised learning (SSL) algorithms are promising in reducing the cost of manual annotation of clinicians by using unlabelled data, when developing medical image segmentation tools. However, to date, most existing semi-supervised learning (SSL) algorithms treat the labelled images and unlabelled images separately and ignore the explicit connection between them; this disregards essential shared information and thus hinders further performance improvements. To mine the shared information between the labelled and unlabelled images, we introduce a class-specific representation extraction approach, in which a task-affinity module is specifically designed for representation extraction. We further cast the representation into two different views of feature maps; one is focusing on low-level context, while the other concentrates on structural information. The two views of feature maps are incorporated into the task-affinity module, which then extracts the class-specific representations to aid the knowledge transfer from the labelled images to the unlabelled images. In particular, a task-affinity consistency loss between the labelled images and unlabelled images based on the multi-scale class-specific representations is formulated, leading to a significant performance improvement. Experimental results on three datasets show that our method consistently outperforms existing state-of-the-art methods. Our findings highlight the potential of consistency between class-specific knowledge for semi-supervised medical image segmentation. The code and models are to be made publicly available at https://github.com/jingkunchen/TAC.
引用
收藏
页码:594 / 605
页数:12
相关论文
共 52 条
[1]  
Bachman P, 2014, ADV NEUR IN, V27
[2]  
Bahdanau D, 2016, Arxiv, DOI [arXiv:1409.0473, 10.48550/arXiv.1409.0473,1409.0473, DOI 10.48550/ARXIV.1409.0473,1409.0473]
[3]   Semi-supervised Medical Image Segmentation via Learning Consistency Under Transformations [J].
Bortsova, Gerda ;
Dubost, Florian ;
Hogeweg, Laurens ;
Katramados, Ioannis ;
de Bruijne, Marleen .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2019, PT VI, 2019, 11769 :810-818
[4]  
Chen J., 2019, INT WORKSHOP STAT AT, P317
[5]   Semi-supervised Brain Lesion Segmentation with an Adapted Mean Teacher Model [J].
Cui, Wenhui ;
Liu, Yanlin ;
Li, Yuxing ;
Guo, Menghao ;
Li, Yiming ;
Li, Xiuli ;
Wang, Tianle ;
Zeng, Xiangzhu ;
Ye, Chuyang .
INFORMATION PROCESSING IN MEDICAL IMAGING, IPMI 2019, 2019, 11492 :554-565
[6]   Multiregion Segmentation Based on Compact Shape Prior [J].
Fan, Ran ;
Jin, Xiaogang ;
Wang, Charlie C. L. .
IEEE TRANSACTIONS ON AUTOMATION SCIENCE AND ENGINEERING, 2015, 12 (03) :1047-1058
[7]  
Feng Cheng, 2020, Medical Image Computing and Computer Assisted Intervention - MICCAI 2020. 23rd International Conference. Proceedings. Lecture Notes in Computer Science (LNCS 12264), P108, DOI 10.1007/978-3-030-59719-1_11
[8]   Significant benefit of multimodal imaging: PET/CT compared with PET alone in staging and follow-up of patients with Ewing tumors [J].
Gerth, Hans U. ;
Juergens, Kai U. ;
Dirksen, Uta ;
Gerss, Joachim ;
Schober, Otmar ;
Franzius, Christiane .
JOURNAL OF NUCLEAR MEDICINE, 2007, 48 (12) :1932-1939
[9]   Automated left atrial time-resolved segmentation in MRI long-axis cine images using active contours [J].
Gonzales, Ricardo A. ;
Seemann, Felicia ;
Lamy, Jerome ;
Arvidsson, Per M. ;
Heiberg, Einar ;
Murray, Victor ;
Peters, Dana C. .
BMC MEDICAL IMAGING, 2021, 21 (01)
[10]   Multimodal magnetic resonance imaging: The coordinated use of multiple, mutually informative probes to understand brain structure and function [J].
Hao, Xuejun ;
Xu, Dongrong ;
Bansal, Ravi ;
Dong, Zhengchao ;
Liu, Jun ;
Wang, Zhishun ;
Kangarlu, Alayar ;
Liu, Feng ;
Duan, Yunsuo ;
Shova, Satie ;
Gerber, Andrew J. ;
Peterson, Bradley S. .
HUMAN BRAIN MAPPING, 2013, 34 (02) :253-271