A biphasic model of lifespan in nematode Caenorhabditis elegans worm

被引:1
作者
Mulla, Suhayl [1 ,2 ]
Ludlam, Adele R. [1 ]
Elragig, Aiman [2 ,3 ]
Slack, Cathy [1 ]
Balklava, Zita [1 ]
Stich, Michael [2 ,4 ]
Cheong, Alex [1 ]
机构
[1] Aston Univ, Life & Hlth Sci, Birmingham B4 7ET, England
[2] Aston Univ, Engn & Appl Sci, Birmingham B4 7ET, England
[3] London Sch Hyg & Trop Med, Fac Infect & Trop Dis, London W1S 4BS, England
[4] Univ Rey Juan Carlos, Departmento Matemat Aplicada, Ciencia Ingn Mat & Tecnol Elect, Mostoles 28933, Spain
基金
英国工程与自然科学研究理事会;
关键词
lifespan curve; mathematical modelling; Caenorhabditis elegans; Drosophila melanogaster; MORTALITY; POPULATIONS; GOMPERTZ; WEIBULL; LONG;
D O I
10.1098/rsos.220991
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Ageing research focuses on identifying lifespan modifiers and understanding and appropriately interpreting their effects. One of the most relevant quantities being studied is the shape of the survival curve that can reveal crucial information on the mechanism of action. Here, we introduce a bilogistic model to describe the shape of the lifespan curves of Caenorhabditis elegans populations. Using the corrected Akaike information criterion and the RMSE as goodness-of-fit tests, we show that the bilogistic model provides a better fit to the experimental data from nematode worms than other mathematical models and can identify and confirm biphasic lifespan data. Our parametric model offers a method to interpret replicate experiments data in terms of the shape parameters of the lifespan curve and enables robust statistical analysis of intra- and inter-group variance. We apply the model to novel lifespan data from C. elegans and Drosophila melanogaster and provide a rational statistical analysis of lifespan modifiers such as temperature and daf-16/FOXO mutation.
引用
收藏
页数:12
相关论文
共 35 条
[1]   Information Theory and an Extension of the Maximum Likelihood Principle [J].
Akaike, Hirotogu .
Trees - Structure and Function, 2015, 29 (06) :655-662
[2]   Automated lifespan determination across Caenorhabditis strains and species reveals assay-specific effects of chemical interventions [J].
Banse, Stephen A. ;
Lucanic, Mark ;
Sedore, Christine A. ;
Coleman-Hulbert, Anna L. ;
Plummer, W. Todd ;
Chen, Esteban ;
Kish, Jason L. ;
Hall, David ;
Onken, Brian ;
Presley, Michael P. ;
Jones, E. Grace ;
Blue, Benjamin W. ;
Garrett, Theo ;
Abbott, Mark ;
Xue, Jian ;
Guo, Suzhen ;
Johnson, Erik ;
Foulger, Anna C. ;
Chamoli, Manish ;
Falkowski, Ron ;
Melentijevic, Ilija ;
Harinath, Girish ;
Huynh Phu ;
Patel, Shobhna ;
Edgar, Daniel ;
Jarrett, Cody M. ;
Guo, Max ;
Kapahi, Pankaj ;
Lithgow, Gordon J. ;
Driscoll, Monica ;
Phillips, Patrick C. .
GEROSCIENCE, 2019, 41 (06) :945-960
[3]   Optimization of dietary restriction protocols in Drosophila [J].
Bass, Timothy M. ;
Grandison, Richard C. ;
Wong, Richard ;
Martinez, Pedro ;
Partridge, Linda ;
Piper, Matthew D. W. .
JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES, 2007, 62 (10) :1071-1081
[4]   Caloric restriction reduces age-related and all-cause mortality in rhesus monkeys [J].
Colman, Ricki J. ;
Beasley, T. Mark ;
Kemnitz, Joseph W. ;
Johnson, Sterling C. ;
Weindruch, Richard ;
Anderson, Rozalyn M. .
NATURE COMMUNICATIONS, 2014, 5
[5]   Two phases of aging separated by the Smurf transition as a public path to death [J].
Dambroise, E. ;
Monnier, L. ;
Ruisheng, L. ;
Aguilaniu, H. ;
Joly, J-S ;
Tricoire, H. ;
Rera, M. .
SCIENTIFIC REPORTS, 2016, 6
[6]  
Goel Manish Kumar, 2010, Int J Ayurveda Res, V1, P274, DOI 10.4103/0974-7788.76794
[7]  
Gompertz Benjamin., 1825, PHILOS T ROYAL SOC L, V115, P513, DOI [10.1098/rstl.1825.0026, DOI 10.1098/RSPL.1815.0271]
[8]   NONPARAMETRIC-ESTIMATION FROM INCOMPLETE OBSERVATIONS [J].
KAPLAN, EL ;
MEIER, P .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1958, 53 (282) :457-481
[9]   A C-ELEGANS MUTANT THAT LIVES TWICE AS LONG AS WILD-TYPE [J].
KENYON, C ;
CHANG, J ;
GENSCH, E ;
RUDNER, A ;
TABTIANG, R .
NATURE, 1993, 366 (6454) :461-464
[10]   AGING IN NEMATODE CAENORHABDITIS-ELEGANS - MAJOR BIOLOGICAL AND ENVIRONMENTAL-FACTORS INFLUENCING LIFE-SPAN [J].
KLASS, MR .
MECHANISMS OF AGEING AND DEVELOPMENT, 1977, 6 (06) :413-429