Synthesis, Biological Evaluation, and Molecular Modeling Studies of New 1,3,4-Thiadiazole Derivatives as Potent Antimicrobial Agents

被引:16
作者
cevik, Ulviye Acar [1 ]
Celik, Ismail [2 ]
Ince, Ufuk [3 ]
Maryam, Zahra [1 ]
Ahmad, Iqrar [4 ]
Patel, Harun [4 ]
Ozkay, Yusuf [1 ]
Kaplancikli, Zafer Asim [1 ]
机构
[1] Anadolu Univ, Fac Pharm, Dept Pharmaceut Chem, TR-26470 Eskisehir, Turkiye
[2] Erciyes Univ, Fac Pharm, Dept Pharmaceut Chem, TR-38039 Kayseri, Turkiye
[3] Erciyes Univ, Fac Pharm, Dept Pharmaceut Microbiol, TR-38039 Kayseri, Turkiye
[4] R C Patel Inst Pharmaceut Educ & Res, Dept Pharmaceut Chem, Div Comp Aided Drug Design, Shirpur 425405, Maharashtra, India
关键词
antimicrobial; DFT; MD simulation; molecular docking; thiadiazole; INHIBITORS; DYNAMICS; DESIGN;
D O I
10.1002/cbdv.202201146
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this work, the synthesis, characterization, and biological activities of a new series of 1,3,4-thiadiazole derivatives were investigated. The structures of final compounds were identified using H-1-NMR, C-13-NMR, elemental analysis, and HRMS. All the new synthesized compounds were then screened for their antimicrobial activity against four types of pathogenic bacteria and one fungal strain, by application of the MIC assays, using Ampicilin, Gentamycin, Vancomycin, and Fluconazole as standards. Among the compounds, the MIC values of 4 and 8 mu g/mL of the compounds 3f and 3g, respectively, are remarkable and indicate that these compounds are good candidates for antifungal activity. The docking experiments were used to identify the binding forms of produced ligands with sterol 14-demethylase to acquire insight into relevant proteins. The MD performed about 100 ns simulations to validate selected compounds' theoretical studies. Finally, using density functional theory (DFT) to predict reactivity, the chemical characteristics and quantum factors of synthesized compounds were computed. These results were then correlated with the experimental data. Furthermore, computational estimation was performed to predict the ADME properties of the most active compound 3f.
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页数:13
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共 57 条
[1]   Synthesis, molecular modelling study of the methaqualone analogues as anti-convulsant agent with improved cognition activity and minimized neurotoxicity [J].
Ahmad, Iqrar ;
Akand, Sazedur Rahman ;
Shaikh, Matin ;
Pawara, Rahul ;
Manjula, S. N. ;
Patel, Harun .
JOURNAL OF MOLECULAR STRUCTURE, 2022, 1251
[2]   Computational investigation of phytochemicals from Withania somnifera (Indian ginseng/ashwagandha) as plausible inhibitors of GluN2B-containing NMDA receptors [J].
Ahmad, Iqrar ;
Kumar, Dileep ;
Patel, Harun .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2022, 40 (17) :7991-8003
[3]   Optimizing Bedaquiline for cardiotoxicity by structure based virtual screening, DFT analysis and molecular dynamic simulation studies to identify selective MDR-TB inhibitors [J].
Iqrar Ahmad ;
Harsha Jadhav ;
Yashodeep Shinde ;
Vilas Jagtap ;
Rukaiyya Girase ;
Harun Patel .
In Silico Pharmacology, 9 (1)
[4]  
[Anonymous], 2021, Schrodinger Release 2021-4: Desmond Molecular Dynamics System
[5]  
[Anonymous], 2017, Performance standards for antimicrobial susceptibility testing
[6]   Structural modelling and in silico pharmacology of β-carboline alkaloids as potent 5-HT1A receptor antagonists and reuptake inhibitors [J].
Ayipo, Yusuf Oloruntoyin ;
Alananzeh, Waleed A. ;
Ahmad, Iqrar ;
Patel, Harun ;
Mordi, Mohd Nizam .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2023, 41 (13) :6219-6235
[7]   Discovery of oxindole-based FLT3 inhibitors as a promising therapeutic lead for acute myeloid leukemia carrying the oncogenic ITD mutation [J].
Bender, Onur ;
Shoman, Mai E. ;
Ali, Taha F. S. ;
Dogan, Rumeysa ;
Celik, Ismail ;
Mollica, Adriano ;
Hamed, Mohammed I. A. ;
Aly, Omar M. ;
Alamri, Abdulwahab ;
Alanazi, Jowaher ;
Ahemad, Nafees ;
Gan, Siew Hua ;
Malik, Jonaid Ahmad ;
Anwar, Sirajudheen ;
Atalay, Arzu ;
Beshr, Eman A. M. .
ARCHIV DER PHARMAZIE, 2023, 356 (02)
[8]   Structural exploration of selected C6 and C7-substituted coumarin isomers as selective MAO-B inhibitors [J].
Boulaamane, Yassir ;
Ahmad, Iqrar ;
Patel, Harun ;
Das, Niloy ;
Britel, Mohammed Reda ;
Maurady, Amal .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2023, 41 (06) :2326-2340
[9]   Synthesis, Characterization, and Antimicrobial Evaluation of New Imidazo[2,1-b][1,3,4]thiadiazoles Bearing a Chroman Moiety [J].
Butani, S. C. ;
Vekariya, M. K. ;
Dholaria, P., V ;
Kapadiya, K. M. ;
Desai, N. D. .
RUSSIAN JOURNAL OF ORGANIC CHEMISTRY, 2022, 58 (06) :878-883
[10]   Studies toward the structural optimization of new brazilizone-related trypanocidal 1,3,4-thiadiazole-2-arylhydrazone derivatives [J].
Carvalho, Samir A. ;
Lopes, Francisco A. S. ;
Salomao, Kelly ;
Romeiro, Nelilma C. ;
Wardell, Solange M. S. V. ;
de Castro, Solange L. ;
da Silva, Edson F. ;
Fraga, Carlos A. M. .
BIOORGANIC & MEDICINAL CHEMISTRY, 2008, 16 (01) :413-421