Snake River alfalfa virus, a persistent virus infecting alfalfa (Medicago sativa L.) in Washington State, USA

被引:4
作者
Postnikova, Olga A. A. [1 ,2 ]
Irish, Brian M. M. [3 ]
Eisenback, Jonathan [2 ]
Nemchinov, Lev G. G. [1 ]
机构
[1] USDA ARS, Mol Plant Pathol Lab, Beltsville Agr Res Ctr, Beltsville, MD 20705 USA
[2] Virginia Tech, Sch Plant & Environm Sci, Blacksburg, VA USA
[3] USDA ARS, Plant Germplasm Intro Testing & Res Unit, Prosser, WA USA
关键词
Alfalfa; Medicago sativa L; Snake River alfalfa virus; Endornavirus; Seed transmission; PLANT-VIRUSES;
D O I
10.1186/s12985-023-01991-7
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Here we report an occurrence of Snake River alfalfa virus (SRAV) in Washington state, USA. SRAV was recently identified in alfalfa (Medicago sativa L.) plants and western flower thrips in south-central Idaho and proposed to be a first flavi-like virus identified in a plant host. We argue that the SRAV, based on its prevalence in alfalfa plants, readily detectable dsRNA, genome structure, presence in alfalfa seeds, and seed-mediated transmission is a persistent new virus distantly resembling members of the family Endornaviridae.
引用
收藏
页数:7
相关论文
共 20 条
[1]   A Novel Flavi-like Virus in Alfalfa (Medicago sativa L.) Crops along the Snake River Valley [J].
Dahan, Jennifer ;
Wolf, Yuri I. ;
Orellana, Gardenia E. ;
Wenninger, Erik J. ;
Koonin, Eugene V. ;
Karasev, Alexander V. .
VIRUSES-BASEL, 2022, 14 (06)
[2]   MUSCLE: multiple sequence alignment with high accuracy and high throughput [J].
Edgar, RC .
NUCLEIC ACIDS RESEARCH, 2004, 32 (05) :1792-1797
[3]   Endornaviruses: persistent dsRNA viruses with symbiotic properties in diverse eukaryotes [J].
Fukuhara, Toshiyuki .
VIRUS GENES, 2019, 55 (02) :165-173
[4]   Plant viruses transmitted by thrips [J].
Jones, DR .
EUROPEAN JOURNAL OF PLANT PATHOLOGY, 2005, 113 (02) :119-157
[5]   Extraction and electrophoretic analysis of large dsRNAs from desiccated plant tissues infected with plant viruses and biotrophic fungi [J].
Khankhum, S. ;
Escalante, C. ;
Rodrigues de Souto, E. ;
Valverde, R. A. .
EUROPEAN JOURNAL OF PLANT PATHOLOGY, 2017, 147 (02) :431-441
[6]   MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms [J].
Kumar, Sudhir ;
Stecher, Glen ;
Li, Michael ;
Knyaz, Christina ;
Tamura, Koichiro .
MOLECULAR BIOLOGY AND EVOLUTION, 2018, 35 (06) :1547-1549
[7]   BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs [J].
Meleshko, Dmitry ;
Mohimani, Hosein ;
Tracanna, Vittorio ;
Hajirasouliha, Iman ;
Medema, Marnix H. ;
Korobeynikov, Anton ;
Pevzner, Pavel A. .
GENOME RESEARCH, 2019, 29 (08) :1352-1362
[8]   Unusual inheritance of evolutionarily-related double-stranded RNAs in interspecific hybrid between rice plants Oryza sativa and Oryza rufipogon [J].
Moriyama, H ;
Horiuchi, H ;
Nitta, T ;
Fukuhara, T .
PLANT MOLECULAR BIOLOGY, 1999, 39 (06) :1127-1136
[9]   Stringently and developmentally regulated levels of a cytoplasmic double-stranded RNA and its high-efficiency transmission via egg and pollen in rice [J].
Moriyama, H ;
Kanaya, K ;
Wang, JZ ;
Nitta, T ;
Fukuhara, T .
PLANT MOLECULAR BIOLOGY, 1996, 31 (04) :713-719
[10]   SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation [J].
Muhire, Brejnev Muhizi ;
Varsani, Arvind ;
Martin, Darren Patrick .
PLOS ONE, 2014, 9 (09)