Magnetstein: An Open-Source Tool for Quantitative NMR Mixture Analysis Robust to Low Resolution, Distorted Lineshapes, and Peak Shifts

被引:5
|
作者
Domzal, Barbara [1 ]
Nawrocka, Ewa Klaudia [2 ]
Golowicz, Dariusz [3 ]
Ciach, Michal Aleksander [1 ]
Miasojedow, Blaz'ej [1 ]
Kazimierczuk, Krzysztof [2 ]
Gambin, Anna [1 ]
机构
[1] Univ Warsaw, Fac Math Informat & Mech, Banacha 2, PL-02097 Warsaw, Poland
[2] Univ Warsaw, Ctr New Technol, Banacha 2C, PL-02097 Warsaw, Poland
[3] Inst Phys Chem, Polish Acad Sci, Kasprzaka 44-52, PL-01224 Warsaw, Poland
关键词
AUTOMATED QUANTIFICATION ALGORITHM; SPECTRA; DECONVOLUTION; METABOLOMICS; METABOLITES; AQUA; 1D;
D O I
10.1021/acs.analchem.3c03594
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
1H NMR spectroscopy is a powerful tool for analyzing mixtures including determining the concentrations of individual components. When signals from multiple compounds overlap, this task requires computational solutions. They are typically based on peak-picking and the comparison of obtained peak lists with libraries of individual components. This can fail if peaks are not sufficiently resolved or when peak positions differ between the library and the mixture. In this paper, we present Magnetstein, a quantification algorithm rooted in the optimal transport theory that makes it robust to unexpected frequency shifts and overlapping signals. Thanks to this, Magnetstein can quantitatively analyze difficult spectra with the estimation trueness an order of magnitude higher than that of commercial tools. Furthermore, the method is easier to use than other approaches, having only two parameters with default values applicable to a broad range of experiments and requiring little to no preprocessing of the spectra.
引用
收藏
页码:188 / 196
页数:9
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