Homology Modeling, Molecular Dynamics Simulation, and Prediction of Bovine TLR2 Heterodimerization

被引:1
作者
Mansouri, Alireza [1 ]
Yousef, Mohamed Samy [1 ,2 ]
Kowsar, Rasoul [3 ]
Miyamoto, Akio [1 ]
机构
[1] Obihiro Univ Agr & Vet Med, Global AgroMed Res Ctr GAMRC, Obihiro 0808555, Japan
[2] Assiut Univ, Fac Vet Med, Dept Theriogenol, Assiut 71515, Egypt
[3] Isfahan Univ Technol, Coll Agr, Dept Anim Sci, Esfahan 8415683111, Iran
基金
日本学术振兴会;
关键词
bovine toll-like receptors; dimerization; homology modeling; TOLL-LIKE RECEPTOR-2; PROTEIN STRUCTURES; POLYMORPHISMS; RECOGNITION; GROMACS; BINDING; CHARMM; TOOL;
D O I
10.3390/ijms25031496
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Toll-like receptor 2 (TLR2) is a major membrane-bound receptor with ligand and species specificity that activates the host immune response. Heterodimerization of TLR2 with TLR1 (TLR2/1) or TLR6 (TLR2/6), triggered by ligand binding, is essential to initiating the signaling pathway. Bovine TLR2 (bTLR2) heterodimerization has not been defined yet compared with human and mouse TLR2s (hTLR2 and mTLR2). The aim of the present study was to model bovine TLRs (TLRs 1, 2 and 6) and create the heterodimeric forms of the bovine TLR2 using molecular dynamics (MD) simulations. We compared the intermolecular interactions in bTLR2/1-PAM3 and bTLR2/6-PAM2 with the hTLR2 and mTLR2 complexes through docking simulations and subsequent MD analyses. The present computational findings showed that bTLR2 dimerization could have a biological function and activate the immune response, similar to hTLR2 and mTLR2. Agonists and antagonists that are designed for hTLR2 and mTLR2 can target bTLR2. However, the experimental approaches to comparing the functional immune response of TLR2 across species were missing in the present study. This computational study provides a structural analysis of the bTLR2 interaction with bTLR1 and bTLR6 in the presence of an agonist/antagonist and reveals the three-dimensional structure of bTLR2 dimerization. The present findings could guide future experimental studies targeting bTLR2 with different ligands and lipopeptides.
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页数:18
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