Screening of marine sediment-derived microorganisms and their bioactive metabolites: a review

被引:5
作者
Yao, Hongli [1 ,3 ,6 ]
Liu, Shuangping [1 ,2 ,3 ,4 ,5 ]
Liu, Tiantian [1 ,3 ,4 ,5 ]
Ren, Dongliang [1 ,3 ]
Yang, Qilin [1 ,3 ]
Zhou, Zhilei [1 ,2 ,3 ,4 ,5 ]
Mao, Jian [1 ,2 ,3 ,4 ,5 ]
机构
[1] Jiangnan Univ, Natl Engn Res Ctr Cereal Fermentat & Food Biomfg, Sch Food Sci & Technol, Wuxi 214122, Jiangsu, Peoples R China
[2] Southern Marine Sci & Engn Guangdong Lab, Guangzhou 511458, Guangdong, Peoples R China
[3] Jiangnan Univ, Jiangsu Prov Engn Res Ctr Bioact Prod Proc Technol, Wuxi 214122, Jiangsu, Peoples R China
[4] Jiangnan Univ, Shaoxing Ind Technol Res Inst, Shaoxing 31200, Zhejiang, Peoples R China
[5] Zhejiang Guyuelongshan Shaoxing Wine CO LTD, Natl Engn Res Ctr Huangjiu, Shaoxing 646000, Zhejiang, Peoples R China
[6] Bozhou Univ, Dept Biol & Food Engn, Bozhou 236800, Anhui, Peoples R China
基金
中国国家自然科学基金;
关键词
Bioactive substances; Marine sediment; Microorganisms; Functional properties; Omics analysis; COMPLETE GENOME SEQUENCE; DEEP-SEA; ALGINATE LYASE; BIOCHEMICAL-CHARACTERIZATION; SECONDARY METABOLITES; ENZYME; OPTIMIZATION; IDENTIFICATION; BIOSYNTHESIS; ANTIBIOTICS;
D O I
10.1007/s11274-023-03621-4
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Marine sediments are one of the largest habitats on Earth, and their unique ecology, such as high salinity, high pressure, and hypoxia, may activate certain silent genes in marine microbes, resulting in microbes, enzymes, active products, and specific metabolic pathways that can adapt to these specific ecological environments. Marine sediment-derived microorganisms and their bioactive metabolites are of great significance and have potential commercial development prospects for food, pharmaceutical, chemical industries, agriculture, environmental protection and human nutrition and health. In recent years, although there have been numerous scientific reports surrounding marine sediment-derived microorganisms and their bioactive metabolites, a comprehensive review of their research progress is lacking. This paper presents the development and renewal of traditional culture-dependent and omics analysis techniques and their application to the screening of marine sediment-derived microorganisms producing bioactive substances. It also highlights recent research advances in the last five years surrounding the types, functional properties and potential applications of bioactive metabolites produced by marine sediment-derived microorganisms. These bioactive metabolites mainly include antibiotics, enzymes, enzyme inhibitors, sugars, proteins, peptides, and some other small molecule metabolites. In addition, the review ends with concluding remarks on the challenges and future directions for marine sediment-derived microorganisms and their bioactive metabolites. The review report not only helps to deepen the understanding of marine sediment-derived microorganisms and their bioactive metabolites, but also provides some useful information for the exploitation and utilization of marine microbial resources and the mining of new compounds with potential functional properties.
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页数:24
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共 189 条
[1]   Recent Advances in Producing Sugar Alcohols and Functional Sugars by Engineering Yarrowia lipolytica [J].
Abbasi, Abdul Rahman ;
Liu, Jinle ;
Wang, Zhi ;
Zhao, Anqi ;
Ying, Hanjie ;
Qu, Lingbo ;
Alam, Md. Asraful ;
Xiong, Wenlong ;
Xu, Jingliang ;
Lv, Yongkun .
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 2021, 9
[2]   Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities [J].
Acinas, Silvia G. ;
Sanchez, Pablo ;
Salazar, Guillem ;
Cornejo-Castillo, Francisco M. ;
Sebastian, Marta ;
Logares, Ramiro ;
Royo-Llonch, Marta ;
Paoli, Lucas ;
Sunagawa, Shinichi ;
Hingamp, Pascal ;
Ogata, Hiroyuki ;
Lima-Mendez, Gipsi ;
Roux, Simon ;
Gonzalez, Jose M. ;
Arrieta, Jesus M. ;
Alam, Intikhab S. ;
Kamau, Allan ;
Bowler, Chris ;
Raes, Jeroen ;
Pesant, Stephane ;
Bork, Peer ;
Agusti, Susana ;
Gojobori, Takashi ;
Vaque, Dolors ;
Sullivan, Matthew B. ;
Pedros-Alio, Carlos ;
Massana, Ramon ;
Duarte, Carlos M. ;
Gasol, Josep M. .
COMMUNICATIONS BIOLOGY, 2021, 4 (01)
[3]   Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis [J].
Aguiar-Pulido, Vanessa ;
Huang, Wenrui ;
Suarez-Ulloa, Victoria ;
Cickovski, Trevor ;
Mathee, Kalai ;
Narasimhan, Giri .
EVOLUTIONARY BIOINFORMATICS, 2016, 12 :5-16
[4]   Cell wall polysaccharides from pathogenic fungi for diagnosis of fungal infectious disease [J].
Ahamefula Osibe, Dandy ;
Lei, Shuhan ;
Wang, Bin ;
Jin, Cheng ;
Fang, Wenxia .
MYCOSES, 2020, 63 (07) :644-652
[5]   Bioactive Peptides: Synthesis, Sources, Applications, and Proposed Mechanisms of Action [J].
Akbarian, Mohsen ;
Khani, Ali ;
Eghbalpour, Sara ;
Uversky, Vladimir N. .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (03)
[6]   Marine microorganisms as an untapped source of bioactive compounds [J].
Ameen, Fuad ;
AlNadhari, Saleh ;
Al-Homaidan, Ali A. .
SAUDI JOURNAL OF BIOLOGICAL SCIENCES, 2021, 28 (01) :224-231
[7]   Characterization of exopolysaccharide produced from marine-derived Aspergillus terreus SEI with prominent biological activities [J].
Amer, Mohamed Saleh ;
Zaghloul, Eman H. ;
Ibrahim, Mohamed Ia .
EGYPTIAN JOURNAL OF AQUATIC RESEARCH, 2020, 46 (04) :363-369
[8]   The role of antibiotics and antibiotic resistance in nature [J].
Aminov, Rustam I. .
ENVIRONMENTAL MICROBIOLOGY, 2009, 11 (12) :2970-2988
[9]   Third-Generation Sequencing: The Spearhead towards the Radical Transformation of Modern Genomics [J].
Athanasopoulou, Konstantina ;
Boti, Michaela A. ;
Adamopoulos, Panagiotis G. ;
Skourou, Paraskevi C. ;
Scorilas, Andreas .
LIFE-BASEL, 2022, 12 (01)
[10]   Antioxidant and Cytotoxic Activities of Exopolysaccharides from Alcaligenes faecalis Species Isolated from the Marine Environment of Mauritius [J].
Aullybux, Aadil Ahmad ;
Puchooa, Daneshwar ;
Bahorun, Theeshan ;
Jeewon, Rajesh ;
Wen, Xuesong ;
Matin, Poona .
JOURNAL OF POLYMERS AND THE ENVIRONMENT, 2022, 30 (04) :1462-1477