Arthrobacter zhaoxinii sp. nov. and Arthrobacter jinronghuae sp. nov., isolated froco Marmota himalayana

被引:1
作者
Zhang, Gui [1 ,2 ]
Cheng, Yanpeng [3 ]
Li, Weiguang [1 ,2 ]
Chen, Yulu [2 ]
Yang, Jing [2 ,4 ,5 ]
Jin, Dong [2 ,4 ,5 ]
Lu, Shan [2 ,4 ,5 ]
Xu, Jianguo [2 ,4 ,5 ,6 ]
机构
[1] Shandong First Med Univ, Dept Infect Control, Shandong Prov Hosp, Jinan 250021, Peoples R China
[2] Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, Natl Key Lab Intelligent Tracking & Forecasting In, Beijing 102206, Peoples R China
[3] Shenzhen Ctr Dis Control & Prevent, Shenzhen 518073, Peoples R China
[4] Chinese Acad Med Sci, Res Unit Discovery Unknown Bacteria, Beijing 102206, Peoples R China
[5] Chinese Acad Med Sci, Res Unit Funct, Beijing 102206, Peoples R China
[6] Nankai Univ, Inst Publ Hlth, Tianjin 300071, Peoples R China
关键词
ANI; Arthrobacter; dDDH; Novel species; Phylogenetic analysis; TAXONOMY; GENE;
D O I
10.1099/ijsem.0.006168
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Four yellow- coloured strains (zg- Y815T/zg-Y108 and zg-Y859T/zg- Y826) were isolated from the intestinal contents of Marmota himalayana and assigned to the 'Arthrobacter citreus group'. The four strains grew optimally on brain heart infusion agar with 5 % defibrinated sheep blood plate at 30 degrees C, pH 7.0 and with 0.5 % NaCl (w/v). Comparative analysis of their 16S rRNA genes indicated that the two strain pairs belong to the genus Arthrobacter, showing the highest similarity to Arthrobacter yangruifuii 785T (99.52 %), which was further confirmed by the 16S rRNA gene and genome- based phylogenetic analysis. The comparative genomic analysis [digital DNA-DNA hybridization, (dDDH) and average nucleotide identity (ANI)] proved that the four strains are two different species (zg- Y815T/zg- Y108, 71.7 %/96.8 %; zg- Y859T/zg- Y826, 87.3 %/98.5 %) and differ from other known species within the genus Arthrobacter (zg-Y815T, 19.6-32.3%/77.2-88.0%; zg-Y859T, 19.5-29.3 %/77.4-86.3 %). Strain pairs zg- Y815T/ zg -Y108 and zg-Y859T/zg- Y826 had the same major cellular fatty acids (iso- C16 : 0 and anteiso- C15 :0), with MK - 8(H2) as their dominant respiratory quinone (70.6 and 61.7 %, respectively). The leading polar lipids were diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylinositol. The detected amino acids and cell- wall sugars of the two new species were identical (amino acids: alanine, glutamic acid, and lysine; sugars: rhamnose, galactose, mannose, glucose, and ribose). According to the phylogenetic, phenotypic, and chemotaxonomic analyses, we concluded that the four new strains represented two different novel species in the genus Arthrobacter, for which the names Arthrobacter zhaoxinii sp. nov. (zg- Y815T= GDMCC 1.3494T = JCM 35821T) and Arthrobacter jinronghuae sp. nov. (zg- Y859T = GDMCC 1.3493T = JCM 35822T) are proposed.
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页数:9
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