Identification of Key Ferroptosis-Related Genes in the Peripheral Blood of Patients with Relapsing-Remitting Multiple Sclerosis and Its Diagnostic Value

被引:7
作者
Song, Xi [1 ]
Wang, Zixuan [1 ]
Tian, Zixin [1 ]
Wu, Meihuan [1 ]
Zhou, Yitao [1 ]
Zhang, Jun [1 ]
机构
[1] Chongqing Med Univ, Inst Mol Med & Oncol, Dept Cell Biol & Genet, Med Sch Rd 1, Chongqing 400016, Peoples R China
关键词
multiple sclerosis; ferroptosis; relapsing-remitting multiple sclerosis (RRMS); immune infiltration; diagnostic model; UP-REGULATED PROTEIN-1; CELL-DEATH; KAPOSI-SARCOMA; STRESS; IRON; FINGOLIMOD; EXPRESSION; DISEASE; VDUP1;
D O I
10.3390/ijms24076399
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Multiple sclerosis (MS) is a neurodegenerative disease with a complex pathogenesis. Re-lapsing-remitting multiple sclerosis (RRMS) is the most common subset of MS, accounting for approximately 85% of cases. Recent studies have shown that ferroptosis may contribute to the progression of RRMS, but the underlying mechanism remains to be elucidated. Herein, this study intended to explore the molecular network of ferroptosis associated with RRMS and establish a predictive model for efficacy diagnosis. Firstly, RRMS-related module genes were identified using weighted gene co-expression network analysis (WGCNA). Secondly, the optimal machine learning model was selected from four options: the generalized linear model (GLM), random forest model (RF), support vector machine model (SVM), and extreme gradient boosting model (XGB). Subsequently, the predictive efficacy of the diagnostic model was evaluated using receiver operator characteristic (ROC) analysis. Finally, a SVM diagnostic model based on five genes (JUN, TXNIP, NCOA4, EIF2AK4, PIK3CA) was established, and it demonstrated good predictive performance in the validation dataset. In summary, our study provides a systematic exploration of the complex relationship between ferroptosis and RRMS, which may contribute to a better understanding of the role of ferroptosis in the pathogenesis of RRMS and provide promising diagnostic strategies for RRMS patients.
引用
收藏
页数:16
相关论文
共 61 条
  • [1] Peripheral blood gene expression signature mirrors central nervous system disease: The model of multiple sclerosis
    Achiron, A.
    Gurevich, M.
    [J]. AUTOIMMUNITY REVIEWS, 2006, 5 (08) : 517 - 522
  • [2] Inferring Multiple Sclerosis Stages from the Blood Transcriptome via Machine Learning
    Acquaviva, Massimo
    Menon, Ramesh
    Di Dario, Marco
    Dalla Costa, Gloria
    Romeo, Marzia
    Sangalli, Francesca
    Colombo, Bruno
    Moiola, Lucia
    Martinelli, Vittorio
    Comi, Giancarlo
    Farina, Cinthia
    [J]. CELL REPORTS MEDICINE, 2020, 1 (04)
  • [3] Revealing the genetic basis of multiple sclerosis: are we there yet?
    Baranzini, Sergio E.
    [J]. CURRENT OPINION IN GENETICS & DEVELOPMENT, 2011, 21 (03) : 317 - 324
  • [4] Amino-terminal phosphorylation of c-Jun regulates stress-induced apoptosis and cellular proliferation
    Behrens, A
    Sibilia, M
    Wagner, EF
    [J]. NATURE GENETICS, 1999, 21 (03) : 326 - 329
  • [5] Diagnosis of multiple sclerosis: progress and challenges
    Brownlee, Wallace J.
    Hardy, Todd A.
    Fazekas, Franz
    Miller, David H.
    [J]. LANCET, 2017, 389 (10076) : 1336 - 1346
  • [6] The Molecular Mechanisms of Ferroptosis and Its Role in Blood-Brain Barrier Dysfunction
    Chen, Xiaoshu
    Pang, Xinru
    Yeo, Abrey J.
    Xie, Siwen
    Xiang, Mengting
    Shi, Bin
    Yu, Gongchang
    Li, Chao
    [J]. FRONTIERS IN CELLULAR NEUROSCIENCE, 2022, 16
  • [7] Vitamin D3 upregulated protein 1 (VDUP1) is a regulator for redox signaling and stress-mediated diseases
    Chung, Jin Woong
    Jeon, Jun-Ho
    Yoon, Suk-Ran
    Choi, Inpyo
    [J]. JOURNAL OF DERMATOLOGY, 2006, 33 (10) : 662 - 669
  • [8] Experimental autoimmune encephalomyelitis (EAE) as a model for multiple sclerosis (MS)
    Constantinescu, Cris S.
    Farooqi, Nasr
    O'Brien, Kate
    Gran, Bruno
    [J]. BRITISH JOURNAL OF PHARMACOLOGY, 2011, 164 (04) : 1079 - 1106
  • [9] Polarization dictates iron handling by inflammatory and alternatively activated macrophages
    Corna, Gianfranca
    Campana, Lara
    Pignatti, Emanuele
    Castiglioni, Alessandra
    Tagliafico, Enrico
    Bosurgi, Lidia
    Campanella, Alessandro
    Brunelli, Silvia
    Manfredi, Angelo A.
    Apostoli, Pietro
    Silvestri, Laura
    Camaschella, Clara
    Rovere-Querini, Patrizia
    [J]. HAEMATOLOGICA-THE HEMATOLOGY JOURNAL, 2010, 95 (11): : 1814 - 1822
  • [10] Cree BAC, 2014, HAND CLINIC, V122, P193, DOI 10.1016/B978-0-444-52001-2.00009-1