Embracing lipidomics at single-cell resolution: Promises and pitfalls

被引:18
作者
Wang, Zehua [1 ]
Cao, Mingjun [1 ]
Lam, Sin Man [1 ,2 ]
Shui, Guanghou [1 ,3 ]
机构
[1] Chinese Acad Sci, Inst Genet & Dev Biol, State Key Lab Mol Dev Biol, Beijing 100101, Peoples R China
[2] LipidALL Technol Co Ltd, Changzhou 213022, Jiangsu, Peoples R China
[3] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
基金
国家重点研发计划;
关键词
Single -cell lipidomics; Mass spectrometry; Quanti fication; Lipid identi fication; Nano; -LC; MASS-SPECTROMETRY; HETEROGENEITY; LIPIDS; BIOLOGY; PROBE; METABOLOMICS; METABOLITES; CYTOMETRY; MEMBRANES; SOFTWARE;
D O I
10.1016/j.trac.2023.116973
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Technological innovations have transformed the way scientists approach biological and clinical ques-tions, transiting from conventional ensemble assays in bulk to emphasize on the measurements of single molecules in single cells. In the recent years, single-cell lipidomics is taking on from other omics in adding another dimension of lipid-centric information in individual cells. In this review, we summarize the current technological progress and bottlenecks in single-cell lipidomics, and discuss the unique technical challenges in analyzing lipids within single cells, with particular focus on the importance of accurate lipid identification and quantification. We conclude the review with examples on the potential applications of single-cell lipidomics in biology and clinical medicine -in the construction of cell lineage trees, understanding the heterogeneity of tumor and dissecting host immune responses to various diseases.(c) 2023 Elsevier B.V. All rights reserved.
引用
收藏
页数:12
相关论文
共 135 条
[41]   Fluorescent Probes for Lipid Rafts: From Model Membranes to Living Cells [J].
Klymchenko, Andrey S. ;
Kreder, Remy .
CHEMISTRY & BIOLOGY, 2014, 21 (01) :97-113
[42]  
Kornreich Bruce G, 2007, J Vet Cardiol, V9, P25, DOI 10.1016/j.jvc.2007.02.001
[43]   Quantitative Lipidomics and Spatial MS-Imaging Uncovered Neurological and Systemic Lipid Metabolic Pathways Underlying Troglomorphic Adaptations in Cave-Dwelling Fish [J].
Lam, Sin Man ;
Li, Jie ;
Sun, Huan ;
Mao, Weining ;
Lu, Zongmin ;
Zhao, Qingshuo ;
Han, Chao ;
Gong, Xia ;
Jiang, Binhua ;
Chua, Gek Huey ;
Zhao, Zhenwen ;
Meng, Fanwei ;
Shui, Guanghou .
MOLECULAR BIOLOGY AND EVOLUTION, 2022, 39 (04)
[44]   A multi-omics investigation of the composition and function of extracellular vesicles along the temporal trajectory of COVID-19 [J].
Lam, Sin Man ;
Zhang, Chao ;
Wang, Zehua ;
Ni, Zhen ;
Zhang, Shaohua ;
Yang, Siyuan ;
Huang, Xiahe ;
Mo, Lesong ;
Li, Jie ;
Lee, Bernett ;
Mei, Mei ;
Huang, Lei ;
Shi, Ming ;
Xu, Zhe ;
Meng, Fan-Ping ;
Cao, Wen-Jing ;
Zhou, Ming-Ju ;
Shi, Lei ;
Chua, Gek Huey ;
Li, Bowen ;
Cao, Jiabao ;
Wang, Jun ;
Bao, Shilai ;
Wang, Yingchun ;
Song, Jin-Wen ;
Zhang, Fujie ;
Wang, Fu-Sheng ;
Shui, Guanghou .
NATURE METABOLISM, 2021, 3 (07) :909-+
[45]   High-coverage lipidomics for functional lipid and pathway analyses [J].
Lam, Sin Man ;
Wang, Zehua ;
Li, Bowen ;
Shui, Guanghou .
ANALYTICA CHIMICA ACTA, 2021, 1147 :199-210
[46]   A robust, integrated platform for comprehensive analyses of acyl-coenzyme As and acyl-carnitines revealed chain length-dependent disparity in fatty acyl metabolic fates across Drosophila development [J].
Lam, Sin Man ;
Zhou, Tianxing ;
Li, Jie ;
Zhang, Shaohua ;
Chua, Gek Huey ;
Li, Bowen ;
Shui, Guanghou .
SCIENCE BULLETIN, 2020, 65 (21) :1840-1848
[47]   An integrated method for direct interrogation of sphingolipid homeostasis in the heart and brain tissues of mice through postnatal development up to reproductive senescence [J].
Lam, Sin Man ;
Wang, Raoxu ;
Miao, Huan ;
Li, Bowen ;
Shui, Guanghou .
ANALYTICA CHIMICA ACTA, 2018, 1037 :152-158
[48]   Lipidomics, en route to accurate quantitation [J].
Lam, Sin Man ;
Tian, He ;
Shui, Guanghou .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, 2017, 1862 (08) :752-761
[49]   Sequestration of polyunsaturated fatty acids in membrane phospholipids of Caenorhabditis elegans dauer larva attenuates eicosanoid biosynthesis for prolonged survival [J].
Lam, Sin Man ;
Wang, Zehua ;
Li, Jie ;
Huang, Xun ;
Shui, Guanghou .
REDOX BIOLOGY, 2017, 12 :967-977
[50]   Metabolomics through the lens of precision cardiovascular medicine [J].
Lam, Sin Man ;
Wang, Yuan ;
Li, Bowen ;
Du, Jie ;
Shui, Guanghou .
JOURNAL OF GENETICS AND GENOMICS, 2017, 44 (03) :127-138