Characterization and phylogenetic analysis of the complete mitochondrial genome of Mango tilapia (Sarotherodon galilaeus: Cichlidae)

被引:5
作者
Fiteha, Yosur G. [1 ,2 ]
Rashed, M. A. [1 ]
Ali, R. A. M. [2 ]
Magdy, M. [1 ]
机构
[1] Ain Shams Univ, Fac Agr, Genet Dept, Cairo, Egypt
[2] Ain Shams Univ, Fac Women Arts Sci & Educ, Zool Dept, Cairo, Egypt
关键词
Sarotherodon galilaeus; Mitochondrial genome; NGS; Phylogeny; Cichlid; CATFISH; FISHES;
D O I
10.1007/s11033-023-08288-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
BackgroundSarotherodon galilaeus (Linne, 1758) is a member of the family Cichlidae, which is considered the most important aquaculture freshwater species endemic to Africa and the Middle East. The genetics and molecular biology of this species are rare. This requires more comprehensive mitochondrial genomes-based phylogenetics to enhance understanding of the relationship and delineate this species.Methods and resultsHere, we assembled the complete mitogenome of S. galilaeus using Illumina high-throughput sequencing technology. The mango tilapia mitogenome was 16,631 bp in length with an AT composition of 53.4% and 46.4% GC content. It encodes 37 genes comprising two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and 13 protein-coding genes (PCGs) as well as the D-loop known as the control region. The phylogenetic tree was conducted to provide a relationship within the haplotilapiine lineage based on the maximum likelihood method, and the newly sequenced S. galilaeus was clustered with other Sarotherodon species.ConclusionOur results provide a new perception of the genetic basis of S. galilaeus species for further research on systematics, evolution, population genetics, and molecular ecology.
引用
收藏
页码:3945 / 3950
页数:6
相关论文
共 50 条
[41]   Characterization of the complete mitochondrial genome of Periophthalmus modestus (Gobiiformes, Oxudercidae) and phylogenetic analysis [J].
Song, Ha Yeun ;
Choi, Tae-Young ;
Jo, Seonmi ;
Jung, Seung-Hyun ;
Kim, Bora ;
Choi, Young Ji ;
Yoo, Jong Su .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1934-1935
[42]   Characterization of the complete mitochondrial genome of Spirobolus grahami (Diplopoda: Spirobolidae) with phylogenetic analysis [J].
Zhang, Wenwen ;
Gan, Tianyi ;
Xu, Tangjun ;
Wang, Peng ;
Tai, Jingzhe ;
Ma, Fangzhou .
SCIENTIFIC REPORTS, 2024, 14 (01)
[43]   Characterization and phylogenetic analysis of the complete mitochondrial genome of Bodianus oxycephalus (Perciformes, Labridae) [J].
Wei Niu ;
Lingcong Kong ;
Hongxia Ma ;
Yunhang Gao .
Conservation Genetics Resources, 2018, 10 :491-494
[44]   Characterization and phylogenetic analysis of the complete mitochondrial genome of Terapon theraps (Perciformes: Terapontidae) [J].
Zeng, Lei ;
Chen, Pimao ;
Yu, Jie ;
Chen, Guobao .
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02) :508-509
[45]   Characterization of the complete mitochondrial genome and phylogenetic analysis of Otus sunia (Strigiformes: Strigidae) [J].
Zhou, Chuang ;
Chen, Yinzhu ;
Hao, Yanqin ;
Meng, Yang ;
Yue, Bisong ;
Zeng, Tao .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :804-805
[46]   Characterization and phylogenetic analysis of the complete mitochondrial genome of Glossogbius giuris (Perciformes: Gobiidae) [J].
Wang, Pengfei ;
Zhao, Chao ;
Fan, Sigang ;
Yan, Lulu ;
Qiu, Lihua .
MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01) :395-396
[47]   Characterization and phylogenetic analysis of the complete mitochondrial genome of Aphis spiraecola (Hemiptera: Aphididae) [J].
Du, Yimin ;
Liv, Xinjun ;
Wang, Ying ;
Lu, Zhanjun .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02) :3303-3304
[48]   Characterization and phylogenetic analysis of the complete mitochondrial genome ofProlixicheilus longisulcus(Teleost: Cyprinidae) [J].
Zhou, Lei ;
Huang, Shihui ;
Kuang, Tianxu ;
Li, Yusen .
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03) :2768-2769
[49]   The complete mitochondrial genome sequence of Triplophysa stenura (Teleostei, Cypriniformes): genome characterization and phylogenetic analysis [J].
Yan, Yongliu ;
Luo, Dehuai .
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :607-608
[50]   The complete mitochondrial genome of Pareuchiloglanis gongshanensis (Siluriformes, Sisoridae, Pareuchiloglanis): genome characterization and phylogenetic analysis [J].
Li, Bo ;
Tian, Zhifu ;
Qin, Ya ;
Hao, Meng ;
Zhang, Jiabo .
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :58-59