Characterization and phylogenetic analysis of the complete mitochondrial genome of Mango tilapia (Sarotherodon galilaeus: Cichlidae)

被引:5
|
作者
Fiteha, Yosur G. [1 ,2 ]
Rashed, M. A. [1 ]
Ali, R. A. M. [2 ]
Magdy, M. [1 ]
机构
[1] Ain Shams Univ, Fac Agr, Genet Dept, Cairo, Egypt
[2] Ain Shams Univ, Fac Women Arts Sci & Educ, Zool Dept, Cairo, Egypt
关键词
Sarotherodon galilaeus; Mitochondrial genome; NGS; Phylogeny; Cichlid; CATFISH; FISHES;
D O I
10.1007/s11033-023-08288-6
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
BackgroundSarotherodon galilaeus (Linne, 1758) is a member of the family Cichlidae, which is considered the most important aquaculture freshwater species endemic to Africa and the Middle East. The genetics and molecular biology of this species are rare. This requires more comprehensive mitochondrial genomes-based phylogenetics to enhance understanding of the relationship and delineate this species.Methods and resultsHere, we assembled the complete mitogenome of S. galilaeus using Illumina high-throughput sequencing technology. The mango tilapia mitogenome was 16,631 bp in length with an AT composition of 53.4% and 46.4% GC content. It encodes 37 genes comprising two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and 13 protein-coding genes (PCGs) as well as the D-loop known as the control region. The phylogenetic tree was conducted to provide a relationship within the haplotilapiine lineage based on the maximum likelihood method, and the newly sequenced S. galilaeus was clustered with other Sarotherodon species.ConclusionOur results provide a new perception of the genetic basis of S. galilaeus species for further research on systematics, evolution, population genetics, and molecular ecology.
引用
收藏
页码:3945 / 3950
页数:6
相关论文
共 50 条
  • [1] Characterization and phylogenetic analysis of the complete mitochondrial genome of Mango tilapia (Sarotherodon galilaeus: Cichlidae)
    Yosur G. Fiteha
    M. A. Rashed
    R. A. M. Ali
    M. Magdy
    Molecular Biology Reports, 2023, 50 : 3945 - 3950
  • [2] The complete mitochondrial genome of Sarotherodon galilaeus (Linnaeus, 1758) (Perciformes: Cichlidae) and its phylogenetic placement
    Luo, Congqiang
    Yang, Pinhong
    Wang, Suqin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 920 - 921
  • [3] Complete mitochondrial genome of blackchin tilapia Sarotherodon melanotheron (Perciformes, Cichlidae)
    He, An Yuan
    Tang, Shou Jie
    Jiang, Ying Ting
    Li, Si Fa
    Wang, Cheng Hui
    MITOCHONDRIAL DNA, 2011, 22 (5-6): : 171 - 173
  • [4] Characterization and phylogenetic analysis of the complete mitochondrial genome of the rainbow krib, Pelvicachromis pulcher (Perciformes: Cichlidae)
    Nam, Sang-Eun
    Eom, Hye-Jin
    Park, Hyoung Sook
    Rhee, Jae-Sung
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 918 - 920
  • [5] Characterization and Phylogenetic Analysis of the Complete Mitochondrial Genome of Saturnia japonica
    Jiang Liu
    Junjun Dai
    Jinjin Jia
    Yemei Zong
    Yahao Sun
    Ying Peng
    Lei Wang
    Cen Qian
    Baojian Zhu
    Guoqing Wei
    Biochemical Genetics, 2022, 60 : 914 - 936
  • [6] Characterization and Phylogenetic Analysis of the Complete Mitochondrial Genome of Aythya marila
    Zhang, Lei
    Xia, Tian
    Gao, Xiaodong
    Yang, Xiufeng
    Sun, Guolei
    Zhao, Chao
    Liu, Guangshuai
    Zhang, Honghai
    GENES, 2023, 14 (06)
  • [7] Characterization and Phylogenetic Analysis of the Complete Mitochondrial Genome of Saturnia japonica
    Liu, Jiang
    Dai, Junjun
    Jia, Jinjin
    Zong, Yemei
    Sun, Yahao
    Peng, Ying
    Wang, Lei
    Qian, Cen
    Zhu, Baojian
    Wei, Guoqing
    BIOCHEMICAL GENETICS, 2022, 60 (03) : 914 - 936
  • [8] Characterization of the complete mitochondrial genome sequence of Tanichthys albiventris and phylogenetic analysis
    Yang, Tiezhu
    Tan, Chenxi
    Sun, Wenhao
    Li, Dongpu
    Zhao, Liangjie
    Li, Fan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (02): : 207 - 210
  • [9] Complete mitochondrial genome of Semicossyphus reticulatus: genome characterization and phylogenetic analysis
    Sun, Yuena
    Xu, Tianjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1739 - 1740
  • [10] Characterization and phylogenetic analysis of the complete mitochondrial genome of Notostomum cyclostomum
    Chae, Jun Young
    Kim, Jin Ho
    Kang, Tae-Wook
    Lee, Hyung-Ho
    Kim, Moo-Sang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (09): : 1627 - 1629