Model Identification of E. coli Cultivation Process Applying Hybrid Crow Search Algorithm

被引:1
作者
Roeva, Olympia [1 ,2 ]
Zoteva, Dafina [3 ]
机构
[1] Bulgarian Acad Sci, Dept Bioinformat & Math Modelling, Inst Biophys & Biomed Engn, Acad G Bonchev Str,Bl 105, Sofia 1113, Bulgaria
[2] Bulgarian Acad Sci, Inst Robot, Dept Mechatron Bio Technol Syst, Acad G Bonchev Str,Bl 2, Sofia 1113, Bulgaria
[3] Sofia Univ St Kliment Ohridski, Fac Math & Informat, Dept Comp Informat, Sofia 1164, Bulgaria
来源
FERMENTATION-BASEL | 2024年 / 10卷 / 01期
关键词
model identification; E. coli BL21(DE3)pPhyt109; crow search algorithm; genetic algorithm; sequential quadratic programming; Quasi-Newton method; EXTRACELLULAR PRODUCTION; ESCHERICHIA-COLI; GENETIC ALGORITHM; OPTIMIZATION; INTELLIGENCE; PHYTASE; DESIGN;
D O I
10.3390/fermentation10010012
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Cultivation process (CP) modeling and optimization are ambitious tasks due to the nonlinear nature of the models and interdependent parameters. The identification procedures for such models are challenging. Metaheuristic algorithms exhibit promising performance for such complex problems since a near-optimal solution can be found in an acceptable time. The present research explores a new hybrid metaheuristic algorithm built upon the good exploration of the genetic algorithm (GA) and the exploitation of the crow search algorithm (CSA). The efficiency of the proposed GA-CSA hybrid is studied with the model parameter identification procedure of the E. coli BL21(DE3)pPhyt109 fed-batch cultivation process. The results are compared with those of the pure GA and pure CSA applied to the same problem. A comparison with two deterministic algorithms, i.e., sequential quadratic programming (SQP) and the Quasi-Newton (Q-N) method, is also provided. A more accurate model is obtained by the GA-CSA hybrid with fewer computational resources. Although SQP and Q-N find a solution for a smaller number of function evaluations, the resulting models are not as accurate as the models generated by the three metaheuristic algorithms. The InterCriteria analysis, a mathematical approach to revealing certain relations between given criteria, and a series of statistical tests are employed to prove that there is a statistically significant difference between the results of the three stochastic algorithms. The obtained mathematical models are then successfully verified with a different set of experimental data, in which, again, the closest one is the GA-CSA model. The GA-CSA hybrid proposed in this paper is proven to be successful in the collaborative hybridization of GA and CSA with outstanding performance.
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页数:23
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