The complete genomic sequence of a novel robigovirus, provisionally named "Mentha arvensis robigovirus 1" (MARV1), was determined by combining next-generation sequencing (NGS), reverse transcription polymerase chain reaction (RT-PCR), and rapid amplification of cDNA ends (RACE) PCR. The complete genomic sequence of this new virus is 7617 nucleotides in length, excluding the 3 ' poly(A) tail. The MARV1 genome encodes a putative replicase, "triple gene block" proteins, and a coat protein. Phylogenetic analysis demonstrated that MARV1 is a member of the genus Robigovirus, with closest relationships to African oil palm ringspot virus (AOPRV). Furthermore, MARV1-derived small interfering RNAs (siRNAs) showed typical patterns of plant-virus-derived siRNAs produced by the host antiviral RNA interference pathway. This is the first report of a plant virus of the genus Robigovirus in M. arvensis.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Grabherr, Manfred G.
Haas, Brian J.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Haas, Brian J.
Yassour, Moran
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Hebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Yassour, Moran
Levin, Joshua Z.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Levin, Joshua Z.
Thompson, Dawn A.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Thompson, Dawn A.
Amit, Ido
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Amit, Ido
Adiconis, Xian
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Adiconis, Xian
Fan, Lin
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Fan, Lin
Raychowdhury, Raktima
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Raychowdhury, Raktima
Zeng, Qiandong
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Zeng, Qiandong
Chen, Zehua
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Chen, Zehua
Mauceli, Evan
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Mauceli, Evan
Hacohen, Nir
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Hacohen, Nir
Gnirke, Andreas
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Gnirke, Andreas
Rhind, Nicholas
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Univ Massachusetts, Sch Med, Dept Mol Pharmacol & Biochem, Worcester, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Rhind, Nicholas
di Palma, Federica
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
di Palma, Federica
Birren, Bruce W.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Birren, Bruce W.
Nusbaum, Chad
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Nusbaum, Chad
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Lindblad-Toh, Kerstin
Friedman, Nir
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Hebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Hebrew Univ Jerusalem, Alexander Silberman Inst Life Sci, Jerusalem, IsraelHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Friedman, Nir
Regev, Aviv
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USA
MIT, Howard Hughes Med Inst, Dept Biol, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
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Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Univ Vienna, Fac Comp Sci, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Lam-Tung Nguyen
Schmidt, Heiko A.
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Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Schmidt, Heiko A.
von Haeseler, Arndt
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Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Univ Vienna, Fac Comp Sci, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
von Haeseler, Arndt
Bui Quang Minh
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Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
机构:
Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Grabherr, Manfred G.
Haas, Brian J.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Haas, Brian J.
Yassour, Moran
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Hebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Yassour, Moran
Levin, Joshua Z.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Levin, Joshua Z.
Thompson, Dawn A.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Thompson, Dawn A.
Amit, Ido
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Amit, Ido
Adiconis, Xian
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Adiconis, Xian
Fan, Lin
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Fan, Lin
Raychowdhury, Raktima
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Raychowdhury, Raktima
Zeng, Qiandong
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Zeng, Qiandong
Chen, Zehua
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Chen, Zehua
Mauceli, Evan
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Mauceli, Evan
Hacohen, Nir
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Hacohen, Nir
Gnirke, Andreas
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Gnirke, Andreas
Rhind, Nicholas
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h-index: 0
机构:
Univ Massachusetts, Sch Med, Dept Mol Pharmacol & Biochem, Worcester, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Rhind, Nicholas
di Palma, Federica
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h-index: 0
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
di Palma, Federica
Birren, Bruce W.
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Birren, Bruce W.
Nusbaum, Chad
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Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Nusbaum, Chad
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Lindblad-Toh, Kerstin
Friedman, Nir
论文数: 0引用数: 0
h-index: 0
机构:
Hebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Hebrew Univ Jerusalem, Alexander Silberman Inst Life Sci, Jerusalem, IsraelHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
Friedman, Nir
Regev, Aviv
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst Massachusetts Inst Technol & Harvard, Cambridge, MA USA
MIT, Howard Hughes Med Inst, Dept Biol, Cambridge, MA USAHebrew Univ Jerusalem, Sch Comp Sci, Jerusalem, Israel
机构:
Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Univ Vienna, Fac Comp Sci, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Lam-Tung Nguyen
Schmidt, Heiko A.
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h-index: 0
机构:
Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Schmidt, Heiko A.
von Haeseler, Arndt
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h-index: 0
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Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
Univ Vienna, Fac Comp Sci, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria
von Haeseler, Arndt
Bui Quang Minh
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h-index: 0
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Med Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, AustriaMed Univ Vienna, Univ Vienna, Max F Perutz Labs, Ctr Integrat Bioinformat Vienna, Vienna, Austria