Galantamine Based Novel Acetylcholinesterase Enzyme Inhibitors: A Molecular Modeling Design Approach

被引:45
作者
Silva, Luciane B. [1 ,2 ]
Ferreira, Elenilze F. B. [3 ]
Maryam [4 ]
Espejo-Roman, Jose M. V. [5 ]
Costa, Glauber V. [2 ,6 ]
Cruz, Josiane M. [2 ]
Kimani, Njogu S. [7 ]
Costa, Josivan [2 ]
Bittencourt, Jose A. H. M. N. [2 ]
Cruz, Jorddy [2 ]
Campos, Joaquin M. [5 ]
Santos, Cleydson B. R. [1 ,2 ]
机构
[1] Fed Univ Para, Hlth Sci Inst, Grad Program Med Chem & Mol Modeling, BR-66075110 Belem, Brazil
[2] Univ Fed Amapa, Dept Biol & Hlth Sci, Lab Modeling & Computat Chem, BR-68902280 Macapa, Brazil
[3] Univ State Amapa, Lab Organ Chem & Biochem, BR-68900070 Macapa, Brazil
[4] COMSATS Univ Islamabad, Pk Rd, Islamabad 45550, Pakistan
[5] Univ Granada, Fac Pharm, Dept Pharmaceut Organ Chem, Campus Cartuja, Granada 18071, Spain
[6] Univ Fed Amapa, Dept Biol & Hlth Sci, Lab Biotechnol Nat Prod, BR-68902280 Macapa, Brazil
[7] Univ Embu, Dept Phys Sci, POB 6-60100, Embu, Kenya
关键词
Alzheimer's disease; ADME; molecular docking and molecular dynamics; BINDING HOT-SPOTS; AMYLOID-BETA; LIGAND; IDENTIFICATION; DERIVATIVES; SOLUBILITY; PREDICTION; MORPHINE; DATABASE; PROGRESS;
D O I
10.3390/molecules28031035
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Acetylcholinesterase (AChE) enzymes play an essential role in the development of Alzheimer's disease (AD). Its excessive activity causes several neuronal problems, particularly psychopathies and neuronal cell death. A bioactive pose on the hAChE B site of the human acetylcholinesterase (hAChE) enzyme employed in this investigation, which was obtained from the Protein Data Bank (PDB ID 4EY6), allowed for the prediction of the binding affinity and free binding energy between the protein and the ligand. Virtual screening was performed to obtain structures similar to Galantamine (GNT) with potential hAChE activity. The top 200 hit compounds were prioritized through the use of filters in ZincPharmer, with special features related to the pharmacophore. Critical analyses were carried out, such as hierarchical clustering analysis (HCA), ADME/Tox predictions, molecular docking, molecular simulation studies, synthetic accessibility (SA), lipophilicity, water solubility, and hot spots to confirm the stable binding of the two promising molecules (ZINC16951574-LMQC2, and ZINC08342556-LMQC5). The metabolism prediction, with metabolites M3-2, which is formed by Glutathionation reaction (Phase II), M1-2, and M2-2 formed from the reaction of S-oxidation and Aliphatic hydroxylation (Phase I), were both reactive but with no side effects. Theoretical synthetic routes and prediction of synthetic accessibility for the most promising compounds are also proposed. In conclusion, this study shows that in silico modeling can be used to create new drug candidate inhibitors for hAChE. The compounds ZINC16951574-LMQC2, and ZINC08342556-LMQC5 are particularly promising for oral administration because they have a favorable drug-likeness profile, excellent lipid solubility, high bioavailability, and adequate pharmacokinetics.
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页数:31
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