ACCELERATED MOTION CORRECTION FOR MRI USING SCORE-BASED GENERATIVE MODELS

被引:5
作者
Levac, Brett [1 ]
Jalal, Ajil [2 ]
Tamir, Jonathan I. [1 ]
机构
[1] Univ Texas Austin, ECE, Austin, TX 78712 USA
[2] Univ Calif Berkeley, Berkeley, CA USA
来源
2023 IEEE 20TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, ISBI | 2023年
关键词
Magnetic Resonance Imaging (MRI); Motion Correction; Accelerated Reconstruction; Joint Estimation; Score Models; Generative Models; NETWORK; SENSE;
D O I
10.1109/ISBI53787.2023.10230457
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Magnetic Resonance Imaging (MRI) is a powerful medical imaging modality, but unfortunately suffers from long scan times which, aside from increasing operational costs, can lead to image artifacts due to patient motion. Motion during the acquisition leads to inconsistencies in measured data that manifest as blurring and ghosting if unaccounted for in the image reconstruction process. Various deep learning based reconstruction techniques have been proposed which decrease scan time by reducing the number of measurements needed for a high fidelity reconstructed image. Additionally, deep learning has been used to correct motion using end-to-end techniques. This, however, increases susceptibility to distribution shifts at test time (sampling pattern, motion level). In this work we propose a framework for jointly reconstructing highly sub-sampled MRI data while estimating patient motion using score-based generative models. Our method does not make specific assumptions on the sampling trajectory or motion pattern at training time and thus can be flexibly applied to various types of measurement models and patient motion. We demonstrate our framework on retrospectively accelerated 2D brain MRI corrupted by rigid motion.
引用
收藏
页数:5
相关论文
共 19 条
[1]   Score-based diffusion models for accelerated MRI [J].
Chung, Hyungjin ;
Ye, Jong Chul .
MEDICAL IMAGE ANALYSIS, 2022, 80
[2]   Sensitivity Encoding for Aligned Multishot Magnetic Resonance Reconstruction [J].
Cordero-Grande, Lucilio ;
Teixeira, Rui Pedro A. G. ;
Hughes, Emer J. ;
Hutter, Jana ;
Price, Anthony N. ;
Hajnal, Joseph V. .
IEEE TRANSACTIONS ON COMPUTATIONAL IMAGING, 2016, 2 (03) :266-280
[3]   Learning a variational network for reconstruction of accelerated MRI data [J].
Hammernik, Kerstin ;
Klatzer, Teresa ;
Kobler, Erich ;
Recht, Michael P. ;
Sodickson, Daniel K. ;
Pock, Thomas ;
Knoll, Florian .
MAGNETIC RESONANCE IN MEDICINE, 2018, 79 (06) :3055-3071
[4]   Network Accelerated Motion Estimation and Reduction (NAMER): Convolutional neural network guided retrospective motion correction using a separable motion model [J].
Haskell, Melissa W. ;
Cauley, Stephen F. ;
Bilgic, Berkin ;
Hossbach, Julian ;
Splitthoff, Daniel N. ;
Pfeuffer, Josef ;
Setsompop, Kawin ;
Wald, Lawrence L. .
MAGNETIC RESONANCE IN MEDICINE, 2019, 82 (04) :1452-1461
[5]   TArgeted Motion Estimation and Reduction (TAMER): Data Consistency Based Motion Mitigation for MRI Using a Reduced Model Joint Optimization [J].
Haskell, Melissa W. ;
Cauley, Stephen F. ;
Wald, Lawrence L. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2018, 37 (05) :1253-1265
[6]  
Jalal A, 2021, ADV NEUR IN, V34
[7]   Conditional generative adversarial network for 3D rigid-body motion correction in MRI [J].
Johnson, Patricia M. ;
Drangova, Maria .
MAGNETIC RESONANCE IN MEDICINE, 2019, 82 (03) :901-910
[8]   fastMRI: A Publicly Available Raw k-Space and DICOM Dataset of Knee Images for Accelerated MR Image Reconstruction Using Machine Learning [J].
Knoll, Florian ;
Zbontar, Jure ;
Sriram, Anuroop ;
Muckley, Matthew J. ;
Bruno, Mary ;
Defazio, Aaron ;
Parente, Marc ;
Geras, Krzysztof J. ;
Katsnelson, Joe ;
Chandarana, Hersh ;
Zhang, Zizhao ;
Drozdzalv, Michal ;
Romero, Adriana ;
Rabbat, Michael ;
Vincent, Pascal ;
Pinkerton, James ;
Wang, Duo ;
Yakubova, Nafissa ;
Owens, Erich ;
Zitnick, C. Lawrence ;
Recht, Michael P. ;
Sodickson, Daniel K. ;
Lui, Yvonne W. .
RADIOLOGY-ARTIFICIAL INTELLIGENCE, 2020, 2 (01)
[9]   FSE Compensated Motion Correction for MRI Using Data Driven Methods [J].
Levac, Brett ;
Kumar, Sidharth ;
Kardonik, Sofia ;
Tamir, Jonathan I. .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION, MICCAI 2022, PT VI, 2022, 13436 :707-716
[10]   Deformation Corrected Compressed Sensing (DC-CS): A Novel Framework for Accelerated Dynamic MRI [J].
Lingala, Sajan Goud ;
DiBella, Edward ;
Jacob, Mathews .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2015, 34 (01) :72-85