In-solution Selection Methods of DNA-encoded Library

被引:0
作者
Wang, Yingying [1 ]
Li, Xiaomin [1 ]
Cai, Yahui [1 ]
Li, Xiaoyu [2 ,3 ]
Shi, Bingbing [1 ]
机构
[1] Jining Med Univ, Coll Basic Med, Jining 272067, Peoples R China
[2] Univ Hong Kong, State Key Lab Synthet Chem, Dept Chem, Hong Kong, Peoples R China
[3] Innovat & Technol Commiss, Lab Synthet Chem & Chem Biol Ltd, HealthInnoHK, Hong Kong, Peoples R China
来源
CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE | 2023年 / 44卷 / 03期
关键词
complex biological targets DNA-encoded library; Drug discovery; Drug selection; In-solution selection; SMALL-MOLECULE LIBRARIES; LIGAND-TARGET PAIRS; CHEMICAL LIBRARIES; MEMBRANE-PROTEINS; TECHNOLOGY; DISCOVERY; AFFINITY; DESIGN; IDENTIFICATION; BINDING;
D O I
10.7503/cjcu20220438
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
DNA-encoded library(DEL) has become a nearly indispensable technology platform for the development of new drugs in the pharmaceutical industry. The DEL technology has become matured over the past three decades and the rapid development of DEL-compatible chemistries has tremendously improved the chemical diversity of DELs and promoted its application in drug discovery. DEL technology has been widely adopted by pharmaceutical companies, and numerous clinical candidates have been identified from DEL selection. Usually, the selection of DEL is mainly affinity-based selection on solid-phase. The purified target protein is immobilized on the matrix, and then the binders are separated from non-binders by physical washes. In recent years, a series of in-solution selection methods for DEL have been developed , which has further expanded the target scope suitable for DEL and revealing the potential of DEL as an effective tool to explore fundamental biology. This review mainly introduces the selection methods of DEL in-solution phase and their applications , and finally gives a brief outlook on the application of DEL technology to complex biological targets and functional selection.
引用
收藏
页数:12
相关论文
共 102 条
[41]   Selection of DNA-encoded chemical libraries against endogenous membrane proteins on live cells [J].
Huang, Yiran ;
Meng, Ling ;
Nie, Qigui ;
Zhou, Yu ;
Chen, Langdong ;
Yang, Shilian ;
Fung, Yi Man Eva ;
Li, Xiaomeng ;
Huang, Cen ;
Cao, Yan ;
Li, Yizhou ;
Li, Xiaoyu .
NATURE CHEMISTRY, 2021, 13 (01) :77-+
[42]   Impact of DNA-Encoded Chemical Library Technology on Drug Discovery [J].
Keller, Michelle ;
Schira, Kristina ;
Scheuermann, Joerg .
CHIMIA, 2022, 76 (05) :388-395
[43]   Beyond protein binding: recent advances in screening DNA-encoded libraries [J].
Kodadek, Thomas ;
Paciaroni, Nicholas G. ;
Balzarini, Madeline ;
Dickson, Paige .
CHEMICAL COMMUNICATIONS, 2019, 55 (89) :13330-13341
[44]   Scanning Protein Surfaces with DNA-Encoded Libraries [J].
Kunig, Verena B. K. ;
Potowski, Marco ;
Klika Skopic, Mateja ;
Brunschweiger, Andreas .
CHEMMEDCHEM, 2021, 16 (07) :1048-1062
[45]   DNA-Encoded Compound Libraries as Open Source: A Powerful Pathway to NewDrugs [J].
Lerner, Richard A. ;
Brenner, Sydney .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2017, 56 (05) :1164-1165
[46]   Design, preparation, and selection of DNA-encoded dynamic libraries [J].
Li, Gang ;
Zheng, Wenlu ;
Chen, Zitian ;
Zhou, Yu ;
Liu, Yu ;
Yang, Junrui ;
Huang, Yanyi ;
Li, Xiaoyu .
CHEMICAL SCIENCE, 2015, 6 (12) :7097-7104
[47]   Impact of high-throughput screening in biomedical research [J].
Macarron, Ricardo ;
Banks, Martyn N. ;
Bojanic, Dejan ;
Burns, David J. ;
Cirovic, Dragan A. ;
Garyantes, Tina ;
Green, Darren V. S. ;
Hertzberg, Robert P. ;
Janzen, William P. ;
Paslay, Jeff W. ;
Schopfer, Ulrich ;
Sittampalam, G. Sitta .
NATURE REVIEWS DRUG DISCOVERY, 2011, 10 (03) :188-195
[48]   An Integrated Microfluidic Processor for DNA-Encoded Combinatorial Library Functional Screening [J].
MacConnell, Andrew B. ;
Price, Alexander K. ;
Paegel, Brian M. .
ACS COMBINATORIAL SCIENCE, 2017, 19 (03) :181-192
[49]   DNA-Encoded Solid-Phase Synthesis: Encoding Language Design and Complex Oligomer Library Synthesis [J].
MacConnell, Andrew B. ;
McEnaney, Patrick J. ;
Cavett, Valerie J. ;
Paegel, Brian M. .
ACS COMBINATORIAL SCIENCE, 2015, 17 (09) :518-534
[50]   Dynamic Cooperative Glycan Assembly Blocks the Binding of Bacterial Lectins to Epithelial Cells [J].
Machida, Takuya ;
Novoa, Alexandre ;
Gillon, Emilie ;
Zheng, Shuangshuang ;
Claudinon, Julie ;
Eierhoff, Thorsten ;
Imberty, Anne ;
Roemer, Winfried ;
Winssinger, Nicolas .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2017, 56 (24) :6762-6766