Pan-cancer analyses suggest kindlin-associated global mechanochemical alterations

被引:1
作者
Chowdhury, Debojyoti [1 ]
Mistry, Ayush [2 ]
Maity, Debashruti [1 ]
Bhatia, Riti [2 ]
Priyadarshi, Shreyansh [2 ]
Wadan, Simran [2 ]
Chakraborty, Soham [2 ]
Haldar, Shubhasis [1 ,2 ,3 ]
机构
[1] SN Bose Natl Ctr Basic Sci, Dept Chem Biol & Macromol Sci, Kolkata 700106, W Bengal, India
[2] Ashoka Univ, Trivedi Sch Biosci, Dept Biol, Sonipat 131029, Haryana, India
[3] SN Bose Natl Ctr Basic Sci, Tech Res Ctr, Kolkata 700106, W Bengal, India
关键词
EXTRACELLULAR-MATRIX; ADHESION; SERVER; METASTASIS; MUTATIONS; PROTEINS; CELLS;
D O I
10.1038/s42003-024-06044-5
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Kindlins serve as mechanosensitive adapters, transducing extracellular mechanical cues to intracellular biochemical signals and thus, their perturbations potentially lead to cancer progressions. Despite the kindlin involvement in tumor development, understanding their genetic and mechanochemical characteristics across different cancers remains elusive. Here, we thoroughly examined genetic alterations in kindlins across more than 10,000 patients with 33 cancer types. Our findings reveal cancer-specific alterations, particularly prevalent in advanced tumor stage and during metastatic onset. We observed a significant co-alteration between kindlins and mechanochemical proteome in various tumors through the activation of cancer-related pathways and adverse survival outcomes. Leveraging normal mode analysis, we predicted structural consequences of cancer-specific kindlin mutations, highlighting potential impacts on stability and downstream signaling pathways. Our study unraveled alterations in epithelial-mesenchymal transition markers associated with kindlin activity. This comprehensive analysis provides a resource for guiding future mechanistic investigations and therapeutic strategies targeting the roles of kindlins in cancer treatment. Pan-cancer analysis of kindlin genes on patient genomic data reveals a distinct pattern of kindlin activity. Our analysis suggests kindlins as mechanochemical connector of major cancer hallmark pathways.
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页数:16
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