Does mesocosm validation of environmental DNA methods translate to natural environment monitoring applications? A case study detecting a high-profile invader; the red eared slider turtle, Trachemys scripta elegans, in Australia

被引:1
作者
Rojahn, Jack [1 ]
Trujillo-Gonzalez, Alejandro [1 ]
Gleeson, Dianne [1 ]
Cutter, Nathan [2 ]
Furlan, Elise M. [1 ]
机构
[1] Univ Canberra, Ctr Conservat Genet & Genom, Canberra, ACT, Australia
[2] New South Wales Dept Primary Ind, Orange, NSW, Australia
关键词
eDNA; Invasive species; Low detection rates; Turtles; EDNA; BIODIVERSITY; EXTRACTION; TOOL;
D O I
10.1007/s12686-023-01333-3
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
Environmental DNA (eDNA) surveys have gained popularity as a highly sensitive detection tool that generally outperform traditional detection techniques. eDNA surveys can provide a cost-effective means to identify species' distributions and recent incursions, informing the control or containment of invasive species. The red-eared slider turtle, Trachemys scripta elegans, is one of the world's most invasive species and is listed as a priority pest species for management in Australia. In this study, we validate two eDNA assays to detect this invasive turtle in Australia. We demonstrate high sensitivity in a laboratory setting and perfect detection rates in mesocosms for one of these eDNA assays but show that this does not translate to high detection rates in urban waterbodies at sites of known occupancy. In fact, our results suggest eDNA surveys provide sub-optimal performance compared to traditional detection methods for T.s. elegans. We suggest the capacity for eDNA surveys to provide a highly sensitive detection tool must be evaluated in natural environments on a species-by-species basis to understand any limitations and to avoid high error rates from eDNA surveys leading to wasted resources or inappropriate management decisions. For management of T.s. elegans in Australia, clearly defining the utility of certain eDNA based approaches to detect T.s. elegans and their incursions is vital for effective management of this pest species.
引用
收藏
页码:63 / 71
页数:9
相关论文
共 52 条
  • [1] A Brief Review of Non-Avian Reptile Environmental DNA (eDNA), with a Case Study of Painted Turtle (Chrysemys picta) eDNA Under Field Conditions
    Adams, Clare I. M.
    Hoekstra, Luke A.
    Muell, Morgan R.
    Janzen, Fredric J.
    [J]. DIVERSITY-BASEL, 2019, 11 (04):
  • [2] Concurrent visual encounter sampling validates eDNA selectivity and sensitivity for the endangered wood turtle (Glyptemys insculpta)
    Akre, Thomas S.
    Parker, Lillian D.
    Ruther, Ellery
    Maldonado, Jesus E.
    Lemmon, Lorien
    Mclnerney, Nancy Rotzel
    [J]. PLOS ONE, 2019, 14 (04):
  • [3] Andruszkiewicz Allan E., 2021, Environ. DNA, V3, P492, DOI [DOI 10.1002/EDN3.141, 10.1002/edn3.141583, DOI 10.1002/EDN3.141583]
  • [4] The ecology of environmental DNA and implications for conservation genetics
    Barnes, Matthew A.
    Turner, Cameron R.
    [J]. CONSERVATION GENETICS, 2016, 17 (01) : 1 - 17
  • [5] THE ECOLOGY OF THE WESTERN SWAMP TORTOISE PSEUDEMYDURA-UMBRINA (TESTUDINES, CHELIDAE)
    BURBIDGE, AA
    [J]. AUSTRALIAN WILDLIFE RESEARCH, 1981, 8 (01): : 203 - 223
  • [6] The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments
    Bustin, Stephen A.
    Benes, Vladimir
    Garson, Jeremy A.
    Hellemans, Jan
    Huggett, Jim
    Kubista, Mikael
    Mueller, Reinhold
    Nolan, Tania
    Pfaffl, Michael W.
    Shipley, Gregory L.
    Vandesompele, Jo
    Wittwer, Carl T.
    [J]. CLINICAL CHEMISTRY, 2009, 55 (04) : 611 - 622
  • [7] Impact of the introduction of the red-eared slider (Trachemys scripta elegans) on survival rates of the European pond turtle (Emys orbicularis)
    Cadi, A
    Joly, P
    [J]. BIODIVERSITY AND CONSERVATION, 2004, 13 (13) : 2511 - 2518
  • [8] Comparative study of different methods for the extraction of DNA from fish species commercially available in South Africa
    Cawthorn, Donna-Maree
    Steinman, Harris Andrew
    Witthuhn, R. Corli
    [J]. FOOD CONTROL, 2011, 22 (02) : 231 - 244
  • [9] Uses and Misuses of Environmental DNA in Biodiversity Science and Conservation
    Cristescu, Melania E.
    Hebert, Paul D. N.
    [J]. ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 49, 2018, 49 : 209 - 230
  • [10] Darling JA, 2020, DIVERS DISTRIB